Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0782 ATGAACTGTAAGCCTCAGGCTCAGCAACCCCAGAAATGTCCTCGGTGTGATTCTCTCAACACCAAGTTCTGTTACTACAACAACTATAGCCTCTCGCAGCCTCGTTACTTTTGCAAGTCATGTCGGAGGTACTGGACTCAAGGTGGAACCTTGAGGAACGTCCGCGTCGGCGGTGGCTGTCGCAAGCCCAAGCGAACCAAAGGCTCGGCTTCTTCTTCTTCGTCTTCCGCCGACGCTAGTTCTGCCCCGTCGTTTTCGCAGCCGCCGCGAGAGGTGGCCGAGATACAGAAGGACACTTCCGCCGCGTGTTCTGCTTCTGCTGCGGCGGTTCCGTTAATCAGCCCCTTTTATCAAGGCGGTTCATGTGGTGATGATGGTGGGTATTTGTCGTCTCTAGCAGCGATTCAATCGCCGTTCAATCAGATGGGTTCTTGTTCTAATTTGAGTCTTCTTTCTGGGTTCGGTGCTCCTCCTATCCGTCCGTCCTCGCAACCATTTTATCAGATGAGTGCTATCAGAGACAAGGAAGAAGAGAATCTGTATGAAGCAGACCAAGTTTTGATTCAATCGAGCACGGCGAATAGTGGTTCTGCTTCAACTCATAGCCATCATGATTGGACTGAAAGCTTCATCAATAACGTTAACCATAGGGGACCCGATGCCTCTCTGTGGAGCACCACCATGAGTACCACTTCCACAAGTGGGAATTCTCGGAGTCATAATGATACCGTTGGTGGGTCATTTTCTTTTATCCCAAATCACCAGTGGCCTGATCTTCCTGAGTATGACCCTCCTCCTCCTCCATGA 807 0.5068 MNCKPQAQQPQKCPRCDSLNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVRVGGGCRKPKRTKGSASSSSSSADASSAPSFSQPPREVAEIQKDTSAACSASAAAVPLISPFYQGGSCGDDGGYLSSLAAIQSPFNQMGSCSNLSLLSGFGAPPIRPSSQPFYQMSAIRDKEEENLYEADQVLIQSSTANSGSASTHSHHDWTESFINNVNHRGPDASLWSTTMSTTSTSGNSRSHNDTVGGSFSFIPNHQWPDLPEYDPPPPP 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0782 268 MobiDBLite consensus disorder prediction 66 87 - -
Lele13g0782 268 MobiDBLite consensus disorder prediction 222 250 - -
Lele13g0782 268 MobiDBLite consensus disorder prediction 56 90 - -
Lele13g0782 268 ProSitePatterns Zinc finger Dof-type signature. 13 49 IPR003851 GO:0003677|GO:0006355
Lele13g0782 268 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 4 198 IPR045174 GO:0003700|GO:0006355
Lele13g0782 268 Pfam Dof domain, zinc finger 9 65 IPR003851 GO:0003677|GO:0006355
Lele13g0782 268 MobiDBLite consensus disorder prediction 222 268 - -
Lele13g0782 268 ProSiteProfiles Zinc finger Dof-type profile. 11 65 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0782 Lele-ChrLele13 19686373 19687179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0782 13 135 C2C2-Dof Transcription Factor Family AT4G21050 51.181 7.42e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele13g0782 zf-Dof 2.2e-31 No_clan