Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0776 ATGCCCTATATTCTCCAGATTATGGACACCATTCTGGCTTCTTCATCCGCAGGCGACAGAAAAGTCTTAGAGAGGAACAGAAGAAGCCAGATGAAAGCTCTTTGTTCCCAGCTCACCTCACTCGTCCCTCCTCAATCCTCAACGCAGGTTATTTCGCTGTCAGATCAGCTGGGCGAAGCAGCCAACTACATAAAGAAGCTTCAGATAAAGTTGGAGAAGATGAAGGAGAAGAAGCTCAGCCTCATGGGAATCAACAAGCCAAATACTAGTGAGAGTCCAAGTAATGATAGAGGAATGATTATGGGGTCGAAATCGCCCAAAGTTGAGATTCGCCATATGGGTTCAACGTTAGAGGTTTCTGTAATTACAGGGTTGGATTGCCAGTTCATTTTCAACGAGTTCATCCGCATTCTTCACCAAGAACAAGCTCATGTTGTCAGTGCGAGTTATTCAGTCGTTCAAGATACTGTTTTTCATACCATTCACTGTCAGATAGGAGAATGTGGTAGTAGAGCTGGGAGGATATCGGAGAGATTAAGGAGGCTTATCCTCTTCTTTCAAAGAGTTGAAAATTCAGGTACTTCGTCTTCGTCTAGAGGAGATAGGAAAGTCATAGAGAGGAACCGAAGAAGCCAAATGAGGGCTCTTCACTCCCAGCTCAGCTCACTCGTCCCTCGTCAAACCTCCAAGGTGATTTCGCAGTCGGATGTGCTGGGTGAAGCCACCGACTACATTAAGAAGCTTCAGATAAAGTTGGAGAAGATGAAGGACAAGAAACTCAGCCTCATGGGAATCAACAATAACGAGACAACTAATATTAATGGGAGCCGCCTAACTTATAATAATAATAACGGAGCTGTGATTCTGGGGTCGAAATCGCCCAAAGTTGAGATTCACCAAATGGGTTCAACATTAGAAGTTTCTGTGATTACTGGGTTGGATTGCCAGTTCATCTTCAACGAGTTCATTCGCATTCTTCACGAAGAACAAGTTGACATTCTTAACGCCAGTTATTCAGTCGTTCAAGACACTGTTTTCCATACCATCCACTGTCAGATAGGAGAATGTGGTGACAGAGGTGGGAGGATATCGGAGAGATTAAGGAGGTTTGTGTATGGTTCTGGCGCTTTTGAAGAGAATAATGGCAATGGCTTCAATCTGGTTTTCTGA 1170 0.441 MPYILQIMDTILASSSAGDRKVLERNRRSQMKALCSQLTSLVPPQSSTQVISLSDQLGEAANYIKKLQIKLEKMKEKKLSLMGINKPNTSESPSNDRGMIMGSKSPKVEIRHMGSTLEVSVITGLDCQFIFNEFIRILHQEQAHVVSASYSVVQDTVFHTIHCQIGECGSRAGRISERLRRLILFFQRVENSGTSSSSRGDRKVIERNRRSQMRALHSQLSSLVPRQTSKVISQSDVLGEATDYIKKLQIKLEKMKDKKLSLMGINNNETTNINGSRLTYNNNNGAVILGSKSPKVEIHQMGSTLEVSVITGLDCQFIFNEFIRILHEEQVDILNASYSVVQDTVFHTIHCQIGECGDRGGRISERLRRFVYGSGAFEENNGNGFNLVF 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0776 389 Pfam Helix-loop-helix DNA-binding domain 21 68 IPR011598 GO:0046983
Lele13g0776 389 Pfam Helix-loop-helix DNA-binding domain 199 249 IPR011598 GO:0046983
Lele13g0776 389 Gene3D - 189 276 IPR036638 GO:0046983
Lele13g0776 389 Gene3D - 18 91 IPR036638 GO:0046983
Lele13g0776 389 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 17 183 IPR015660 -
Lele13g0776 389 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 15 67 IPR011598 GO:0046983
Lele13g0776 389 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 200 262 IPR036638 GO:0046983
Lele13g0776 389 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 22 82 IPR036638 GO:0046983
Lele13g0776 389 Coils Coil 238 258 - -
Lele13g0776 389 Coils Coil 57 77 - -
Lele13g0776 389 SMART finulus 21 73 IPR011598 GO:0046983
Lele13g0776 389 SMART finulus 203 254 IPR011598 GO:0046983
Lele13g0776 389 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 197 248 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0776 Lele-ChrLele13 19625979 19631382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0776 191 371 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 40.000 1.93e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele13g0776 HLH 6.3e-09 No_clan