Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0775 ATGGAAGATACCACTTCATGGATAAGAAGGACGAAATTCTCTCACACTGTGTGCCACCGATTGGACTCTTCGAGATTGGCCTCGATTCCTCTCCGCATGGAGTCTGAAGCCGTGTCGGGTCTCAAATGGAGGTCTACTGTTTCGTTCAATCTGAACCATGTTGCTGATGCTCCAAAGATGCATCAAAATCCTAATGTGAAAAAGCCAAGATCTGTGTCTCCTTTGCCTGAAACCTCCCTCTCTGACACTTTCCGCGAAGCTAAGCATGAACGAAAGCGGTTCTCAACTCCAGGTCCTCGGAGGAAAGAACATCATGATAAGAATCCTGAGAAGAGGATCACGGGGAAGGTGTCAAATAAGGACTCTCGAGAGGTCAAACCACCGAATTTGAAATCGCCATCGCGAAGCCCGATCTTGTCAAGTTCGAAATCCAGCGATAGCCTGAAGGGTCGGAAGGAATCGGCGTGGACCAAGTATTTTGACCATGCCGGAGGAAGAGTTACTGCCGTGGAAACTGCAGAAGAATGGACAGTTGATCTCTCTAAGCTCTTTCTTGGGCTTAGGTTTGCTCATGGAGCTCATAGCCGACTCTATCGCGGTAATTATAAGGATGAACCTGTTGCCGTGAAACTTATTAGGGTACCAGATGATGACGAAAGTGGAACCATGGCTGGTCGATTAGAGAAACAATTCATTAGAGAAGTCACTCTTTTATCTCGACTGCACCATGAAAATGTTATAAAGTTTGTAGCTGCTTGCAGAAAACCACCTGTTTATTGTGTGATCACAGAATTTCTGTCAGAGGGTTCCTTAAGGGCATATTTGCATAAGTTAGAGCATAAAGCTGTTCCTCTTGAAAAACTAATAGCTTTTGCTCTAGAAATTGCCCGTGGAATGGAATATATACACTCTCAAGGTATCATACATCGAGACCTTAAACCAGGGAATGTCCTTATCAATGAAGATTCTCATCTCAAAATTGCTGATTTTGGCATTGCTTGCGAGGAGGCATACCGTGATGTATTTACTGATGATCCTGGTACATACCGTTGGATGGCCCCCGAGATGATCAAACGTAAATCCTATGGAAGAAAGGTTGATGTGTACAGTTTTGGGCTCATCCTATGGGAAATGGTGACCGGGACAATGCCATATGAGGATATGACTCCCATCCAGGCTGCTTATGCTGTGGTAAATAAGAATTCAAGACCTGTTATTCCTTCAACCTGCCCATCTGCTCTGCGAGCTTTAATTGAGCAATGTTGGTCCTCGCATCCAGAGAAGAGGCCTGAGTTCTGGCAGATTGTCAAGTTATTAGAACAATTTGACTCTTCGTTTTCCCTCAATGGAACCCTGAAACTCCCGCAAAACTTTTGTTGTCAAGACCATAAGAAAGGACTTCTTCATTGGATTCAAAAGCTTGGTCCTGTTCATCAAAATAACGGTCCTGTGCCTAAACCGAAGTTCACTTAA 1473 0.444 MEDTTSWIRRTKFSHTVCHRLDSSRLASIPLRMESEAVSGLKWRSTVSFNLNHVADAPKMHQNPNVKKPRSVSPLPETSLSDTFREAKHERKRFSTPGPRRKEHHDKNPEKRITGKVSNKDSREVKPPNLKSPSRSPILSSSKSSDSLKGRKESAWTKYFDHAGGRVTAVETAEEWTVDLSKLFLGLRFAHGAHSRLYRGNYKDEPVAVKLIRVPDDDESGTMAGRLEKQFIREVTLLSRLHHENVIKFVAACRKPPVYCVITEFLSEGSLRAYLHKLEHKAVPLEKLIAFALEIARGMEYIHSQGIIHRDLKPGNVLINEDSHLKIADFGIACEEAYRDVFTDDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTMPYEDMTPIQAAYAVVNKNSRPVIPSTCPSALRALIEQCWSSHPEKRPEFWQIVKLLEQFDSSFSLNGTLKLPQNFCCQDHKKGLLHWIQKLGPVHQNNGPVPKPKFT 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0775 490 SMART serkin_6 183 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0775 490 ProSiteProfiles Protein kinase domain profile. 183 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0775 490 Gene3D Transferase(Phosphotransferase) domain 1 267 465 - -
Lele13g0775 490 Pfam Protein tyrosine and serine/threonine kinase 189 439 IPR001245 GO:0004672|GO:0006468
Lele13g0775 490 PRINTS Tyrosine kinase catalytic domain signature 347 357 IPR001245 GO:0004672|GO:0006468
Lele13g0775 490 PRINTS Tyrosine kinase catalytic domain signature 263 276 IPR001245 GO:0004672|GO:0006468
Lele13g0775 490 PRINTS Tyrosine kinase catalytic domain signature 366 388 IPR001245 GO:0004672|GO:0006468
Lele13g0775 490 PRINTS Tyrosine kinase catalytic domain signature 410 432 IPR001245 GO:0004672|GO:0006468
Lele13g0775 490 PRINTS Tyrosine kinase catalytic domain signature 301 319 IPR001245 GO:0004672|GO:0006468
Lele13g0775 490 MobiDBLite consensus disorder prediction 82 128 - -
Lele13g0775 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Lele13g0775 490 SUPERFAMILY Protein kinase-like (PK-like) 166 439 IPR011009 -
Lele13g0775 490 FunFam serine/threonine-protein kinase HT1 268 461 - -
Lele13g0775 490 FunFam Serine/threonine-protein kinase isoform 1 173 267 - -
Lele13g0775 490 MobiDBLite consensus disorder prediction 66 80 - -
Lele13g0775 490 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 106 442 - -
Lele13g0775 490 Gene3D Phosphorylase Kinase; domain 1 171 266 - -
Lele13g0775 490 MobiDBLite consensus disorder prediction 55 151 - -
Lele13g0775 490 CDD STKc_MAP3K-like 190 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0775 Lele-ChrLele13 19617474 19619947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0775 2 490 MAP Kinase Kinase Kinase AT5G58950 56.333 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele13g0775 PK_Tyr_Ser-Thr 5.5e-64 CL0016