Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele13g0771 | ATGATCGTCACGAACACGCCGTCGCAGGACCTCGCTCTTACCAATCTCGCCTTCTGCTCACACTCTGATCTTCAGAACTTCGCTGTCCCGGGTTTCAAAAATCGTCGGTGTGCCAAAGTTTCTGCTGCTGAGTCGATACCTGTGAGCAGATTCGTTCCACCTGACAATTTCAATCTGGCAATGTTAACCCTTGAGTTGGACTTCATCAAAAAGGGAAGTAAAAGTGAACAGATTGATGCAGTTCAGCTGGGTAAGCAGCTCAAAAAGAGATTTGTAAACCAGGTCATGACTGCGGGGCAGAAAGTGCTGTTCGAGTATCATGGAAATAATTATAGTTTCACAGTGTGTCAAGCTGTTGTTGAGGGTCAAGATAAATCTAATTCCGTTGAAAGAGGGATGCTATTGGATGACACATACGTTGTATTTGAAACATCACGTGATAGTGGAATAAAGATTGTCAATCAGCGTGAGGCTGCCACAAGCAACATGTTTAAGCAGAAAGAGTTCAATCTTCAGTCATTAGGTATTGGGGGTTTGAGTGCAGAATTTGCAGATATATTTCGAAGAGCTTTTGCATCTCGTGTTTTCCCTCCCCATGTGACTTCTAAGCTAGGGATCAAGCATGTGAAGGGCATGCTACTTTATGGACCTCCTGGGACTGGAAAAACTCTTATGGCACGTCAAATTGGAAAAATTTTGAATGGGAAGGAACCAAAGATTGTAAATGGTCCTGAAGTCTTGAGTAAATTTGTTGGTGAAACTGAGAAGAATGTGAGGGACCTATTTGCTGATGCTGAAAGGGATCAGAAGACTCTAGGGGATGAAAGTGAATTGCATGTCATAATTTTTGATGAAATTGATGCTATTTGCAAGTCAAGAGGTTCAACTCGAGATGGCACAGGAGTTCATGATAGTATTGTAAATCAACTTCTCACTAAGATAGATGGTGTGGAATCGCTGAATAATGTTTTGCTTATTGGAATGACCAACAGAAAGGACATGCTGGATGAAGCTCTTATGAGACCGGGGAGACTAGAAGTCCAAGTTGAGATAAGCCTTCCTGATGAAAATGGCCGATTGCAGATTCTTCAAATTCATACTAACAAGATGAAGGACAATTCTTTTTTATCTCCTGATGTGAATCTTCAAGAGCTTGCTGCTCAAACCAAAAACTACAGTGGTGCTGAACTTGAAGGTGTTGTGAAGAGTGCAGTATCATTTGCTTTAAATAGACAACTTAGTCTAGATGATCTAACCAAGCCAGTGGAGGAAGAGAATATCAAGGTTACAATGGACGATTTTTTGAATGCACTTCATGAAGTTGTTCCTGCATTTGGAGCTTCAACTGATGACCTTGAAAGATGCAGTGGTAAGACTGCACTTGCAGCTAGTGTTGGCATTGACAGCGATTTCCCATATGTCAAGATTGTTTCAGCTGAATCAATGATTGGTCTCCATGAAAGCACTAAATGTGCACAGATTATCAAGGTTTTTGAGGATGCATACAAGTCACCATTGAGCGTCATTATTCTTGATGACATTGAGAGATTGTTGGAGTATGTGGCCATTGGTCCACGGTTTTCAAATTTGATTTCTCAGACACTACTGGTCCTGCTAAAACGGCTTCCTCCAAAGGGAAAAAAGCTCCTGGTTATTAGTACAACAAGTCAACTGATTTTCTTGGACTCAATTGGATCTTGTGATGCTTTCTCTGTCAGTTACCATGTTCCTACATTGAACACAAATGATGTCAAGAAGGTTCTAAAACAGTTGAATGTCTTTGCTGAGGGTGATGTTGATGATGCTGCGGAGGCCTTGAATGATATGCCTATCAAGAAGCTATACAGGTTGATTGAGATGGCAGCCCAAGGTGAACATGGTGGATCTGCAGAAGCAATCTATTCTGGCAAAGAGAAGATTCAGCTATCTCACTTCTATGATTGCCTTCAGGATGTTGTCCGAGTATGA | 1968 | 0.4151 | MIVTNTPSQDLALTNLAFCSHSDLQNFAVPGFKNRRCAKVSAAESIPVSRFVPPDNFNLAMLTLELDFIKKGSKSEQIDAVQLGKQLKKRFVNQVMTAGQKVLFEYHGNNYSFTVCQAVVEGQDKSNSVERGMLLDDTYVVFETSRDSGIKIVNQREAATSNMFKQKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKILNGKEPKIVNGPEVLSKFVGETEKNVRDLFADAERDQKTLGDESELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALMRPGRLEVQVEISLPDENGRLQILQIHTNKMKDNSFLSPDVNLQELAAQTKNYSGAELEGVVKSAVSFALNRQLSLDDLTKPVEEENIKVTMDDFLNALHEVVPAFGASTDDLERCSGKTALAASVGIDSDFPYVKIVSAESMIGLHESTKCAQIIKVFEDAYKSPLSVIILDDIERLLEYVAIGPRFSNLISQTLLVLLKRLPPKGKKLLVISTTSQLIFLDSIGSCDAFSVSYHVPTLNTNDVKKVLKQLNVFAEGDVDDAAEALNDMPIKKLYRLIEMAAQGEHGGSAEAIYSGKEKIQLSHFYDCLQDVVRV | 655 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele13g0771 | 655 | Pfam | ATPase family associated with various cellular activities (AAA) | 212 | 352 | IPR003959 | GO:0005524|GO:0016887 | |
Lele13g0771 | 655 | Pfam | ATPase family associated with various cellular activities (AAA) | 456 | 557 | IPR003959 | GO:0005524|GO:0016887 | |
Lele13g0771 | 655 | FunFam | Vesicle-fusing ATPase | 55 | 152 | - | - | |
Lele13g0771 | 655 | Gene3D | - | 354 | 441 | - | - | |
Lele13g0771 | 655 | Pfam | Cell division protein 48 (CDC48), domain 2 | 77 | 122 | IPR004201 | - | |
Lele13g0771 | 655 | FunFam | Vesicle-fusing ATPase | 354 | 441 | - | - | |
Lele13g0771 | 655 | PANTHER | VESICULAR-FUSION PROTEIN NSF | 34 | 455 | IPR039812 | GO:0016887|GO:0035494 | |
Lele13g0771 | 655 | Pfam | AAA+ lid domain | 379 | 434 | IPR041569 | - | |
Lele13g0771 | 655 | Gene3D | - | 455 | 577 | IPR027417 | - | |
Lele13g0771 | 655 | Gene3D | - | 160 | 353 | IPR027417 | - | |
Lele13g0771 | 655 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 187 | 450 | IPR027417 | - | |
Lele13g0771 | 655 | Gene3D | - | 1 | 52 | - | - | |
Lele13g0771 | 655 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 456 | 622 | IPR027417 | - | |
Lele13g0771 | 655 | SUPERFAMILY | Cdc48 domain 2-like | 54 | 157 | IPR029067 | - | |
Lele13g0771 | 655 | CDD | AAA | 210 | 353 | - | - | |
Lele13g0771 | 655 | FunFam | vesicle-fusing ATPase isoform X1 | 452 | 577 | - | - | |
Lele13g0771 | 655 | SMART | AAA_5 | 451 | 565 | IPR003593 | - | |
Lele13g0771 | 655 | SMART | AAA_5 | 208 | 355 | IPR003593 | - | |
Lele13g0771 | 655 | FunFam | Vesicular-fusion ATPase SEC18 | 164 | 354 | - | - | |
Lele13g0771 | 655 | CDD | AAA | 456 | 555 | - | - | |
Lele13g0771 | 655 | ProSitePatterns | AAA-protein family signature. | 323 | 341 | IPR003960 | GO:0005524|GO:0016887 | |
Lele13g0771 | 655 | Gene3D | - | 54 | 152 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele13g0771 | Lele-ChrLele13 | 19571760 | 19581582 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele13g0771 | 176 | 427 | Calmodulin-binding Proteins | AT3G56690 | 33.858 | 1.29e-30 | 126 |