Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0748 ATGGCGACTCTAGCTCCGAAACACTTGTTCTCTGGATCTTCATCTCCTTCTCCTTCTTCTTTACCTTCAACCTCAACGAAACACCTCTCCCTCCCTTTTTCTTCAATCTCGAAGAAGCCTGTTCATTCACGTGCTATTCGGATCTCCAGCTCCATCTCCAATCCAAGCGGACCTAGCCCAAAACCAGCACAAGCATCCTCCGCTGCTGTCCCCACCACCACCACCACCACCACCGCTGTCTCGGAAGCTTTCGTTTCCCGATTTGCCCCTGACGAGCCCAGGAAGGGCGCTGATATCCTTGTTGAAGCTCTTGAGCGCCAAGGCGTTACCGATGTCTTCGCCTATCCTGGCGGTGCTTCAATGGAGATCCATCAGGCGCTCACACGCTCCAATATCATCCGTAACGTCCTTCCGCGCCATGAGCAAGGCGGCGTTTTCGCCGCCGAGGGATACGCTCGCTCATCCGGCTGTCCCGGCGTCTGCATCGCCACGTCCGGTCCCGGCGCCACCAATCTGGTCAGTGGTCTTGCCGATGCGCTGCTTGATAGTGTACCTCTGATCGCCATAACAGGGCAAGTCCCTCGAAGGATGATCGGTACTGATGCGTTCCAGGAGACGCCCATTGTTGAGGTAACAAGATCGATCACGAAGCATAATTATCTTGTTCTTGATGTTGACGATATTCCTAGGATTGTGAAGGAGGCGTTCTTCTTAGCTACTTCGGGGAGACCAGGCCCAATATTAATCGACGTGCCAAAAGATATACAGCAACAGCTTGCGATTCCTAACTGGGACCAACCGATTAAGCTGCCAGGATACACGGCGAGGCTTCCGAAGTCGCCGGATTGGAATCTGTTAGAGCAGATTGTGAGGTTGATATTGGACTCCAAGAAGCCAGTTCTGTACGTTGGCGGTGGTTGTATGAACTCAAGCGAGGAATTGAGGCGATTTGTGGAACTTACAGGAATCCCTGTTGCTAGTACTTTGATGGGCCTAGGAGTATATCCCATTCCTGATAATTATTCCCTCCAAATGCTTGGAATGCATGGGACAGTGTACGCTAATTATGCCATTGATAAAAGTGATCTGTTGCTTGCATTTGGGGTGAGGTTTGATGATCGAGTGACAGGAAAGCTTGAAGCCTTCGCTAGTCGAGCTAAAATTGTTCATATAGACATTGATTCAGCTGAGATAGGAAAAAACAAGCAGCCTCATGTGTCCGTTTGTGCAGATTTGAAGTTGGCTTTGAAGGCCATTAATCAGATACTAGAGAGCAAAGGGATCAAAGATAAAGTTGATTTTCAAGCTTGGAGAGAAGAGCTGAGCGAGCAAAAACGCAAATTCCCTTCAAGTTACAAGACATTTGAGAAATGCATTTCTCCTCAGTATGCTATTCAGGTATTGGATGAACTGACAAATGGAGATGCAATAATAAGTACGGGAGTAGGACAACACCAGATGTGGGCGGCTCAATTTTACAAATATAAGAGACCTAGACAGTGGTTAACATCAGGGGGTCTTGGGGCTATGGGTTTTGGATTGCCTGCTGCAATTGGGGCTGCTGTGGCTAACCCAAACACTCTTGTAGTGGACATTGATGGTGATGGAAGTTTCATAATGAATGTTCAGGAACTTGCCACTATAAAGGTGGAGAATCTCCCAATTAAGATACTGTTGTTGAATAATCAACACTTGGGTATGGTTGTTCAGTGGGAGGATCGGTTTTATAAATCTAACAGAGCTCACACATATCTGGGAAACCCATCTAAGGAGACTGAGATCTTCCCAAATATGTTGAAGTTTGCTGAAGCTTGTGGCATACCAGCAGCTCGAGTGACCAAGAAAGAGGACCTTAGAGCAGCAATTCTGAAAATGTTGGATACTCCTGGTCCCTATCTTCTCGATGTTATAGTTCCTCATCAAGAGCATGTCTTGCCCATGATTCCAAGTAATGGAACCTTCAATGATGTGATAACAGAGGGTGATGGCAGAACATCTAAGTAA 2004 0.4736 MATLAPKHLFSGSSSPSPSSLPSTSTKHLSLPFSSISKKPVHSRAIRISSSISNPSGPSPKPAQASSAAVPTTTTTTTAVSEAFVSRFAPDEPRKGADILVEALERQGVTDVFAYPGGASMEIHQALTRSNIIRNVLPRHEQGGVFAAEGYARSSGCPGVCIATSGPGATNLVSGLADALLDSVPLIAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVDDIPRIVKEAFFLATSGRPGPILIDVPKDIQQQLAIPNWDQPIKLPGYTARLPKSPDWNLLEQIVRLILDSKKPVLYVGGGCMNSSEELRRFVELTGIPVASTLMGLGVYPIPDNYSLQMLGMHGTVYANYAIDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCADLKLALKAINQILESKGIKDKVDFQAWREELSEQKRKFPSSYKTFEKCISPQYAIQVLDELTNGDAIISTGVGQHQMWAAQFYKYKRPRQWLTSGGLGAMGFGLPAAIGAAVANPNTLVVDIDGDGSFIMNVQELATIKVENLPIKILLLNNQHLGMVVQWEDRFYKSNRAHTYLGNPSKETEIFPNMLKFAEACGIPAARVTKKEDLRAAILKMLDTPGPYLLDVIVPHQEHVLPMIPSNGTFNDVITEGDGRTSK 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0748 667 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 459 659 IPR029061 -
Lele13g0748 667 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 93 656 IPR045229 -
Lele13g0748 667 FunFam Acetolactate synthase 89 272 - -
Lele13g0748 667 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 95 258 IPR012001 GO:0030976
Lele13g0748 667 SUPERFAMILY DHS-like NAD/FAD-binding domain 281 449 IPR029035 -
Lele13g0748 667 CDD TPP_AHAS 459 650 IPR039368 GO:0030976
Lele13g0748 667 MobiDBLite consensus disorder prediction 1 74 - -
Lele13g0748 667 CDD TPP_PYR_POX_like 98 253 - -
Lele13g0748 667 TIGRFAM acolac_lg: acetolactate synthase, large subunit, biosynthetic type 95 659 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Lele13g0748 667 MobiDBLite consensus disorder prediction 44 74 - -
Lele13g0748 667 ProSitePatterns Thiamine pyrophosphate enzymes signature. 518 537 IPR000399 GO:0000287|GO:0030976
Lele13g0748 667 Gene3D - 83 277 - -
Lele13g0748 667 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 91 272 IPR029061 -
Lele13g0748 667 Pfam Thiamine pyrophosphate enzyme, central domain 287 418 IPR012000 GO:0000287|GO:0030976
Lele13g0748 667 FunFam Acetolactate synthase 279 450 - -
Lele13g0748 667 Gene3D - 286 450 - -
Lele13g0748 667 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 481 636 IPR011766 GO:0003824|GO:0030976
Lele13g0748 667 MobiDBLite consensus disorder prediction 8 37 - -
Lele13g0748 667 Gene3D - 451 637 - -
Lele13g0748 667 FunFam Acetolactate synthase, mitochondrial 450 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0748 Lele-ChrLele13 19419246 19421249 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0748 13 19419246 19421249 Lele15g1730 15 10362948 10364942 hybridization
Lele13g0748 13 19419246 19421249 Lele16g1769 16 10367158 10386260 hybridization