Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0730 ATGACTAAGGGAAAACGAGGTATTGAGAAACAACCTTTTCAGCTTCCTGATTTTATTGCTGCCACAGGGATTGAAAAAATCAGACAGGCCTACATTGAGAAAGAGGACAGTAAGAAGTTGAAGCAAAAGCAGAGGGAGCGTATGCAACCAAAAATGGGGAAAATGGATATCGACTACCAGGTTCTTCATGATGCATTCTTTAAATATCAGACAAAGCCAAAGCTGACAAGCCTAGGGGACCTGTACCATGAGGGAAAAGAATTTGAGGTAAAGTTGAGGGAGATGAAACCTGGCCTTTTGTCCCGTGATCTTAAGGAGGCTCTTGGTATGCCTGAGGGCGCTCCACCTCCATGGCTTATTAATATGCAGAGATATGGGCCTCCCCCATCGTACCCTCATCTTAAAATCCCTGGGTTGAATGCTCCTATTCCTCCTGGAGCTAGTTTTGGTTATCATCCTGGTGGATGGGGCAAGCCTCCTGTTGATGAATATGGGCGTCCTCTCTATGGAGATGTATTTGGTGTTCTTCAACAAGAACAACCTAACTACGAGGAGGAACCTGTGGATAAGACCAAACACTGGGGTGACTTGGAAGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGCAGGAAATGGAGGAGGAGGAACTTCAGGATGGTATTCAATCTGTTGATAGTCTTTCAAGCACTCCCACTGGAGTGGAGACGCCTGATTTTATTGACCTTCGTAAGCAGCAGAGGAAGGACTCTGAGAGACCTCTTTATGAAGTACTTGAAGAGAAGGAAGAAAGAATTGCTCCAGGAACTTTACTTGGAACCACCCACACGTATGTGGTCAATACTGGCGCCCAGGACAAGTCAGGTGCTAAAAGGGTTGATTTGCTTAGGGGTCAGAAGTCGGATAAGGTGGATGTTACTTTACAGCCAGAAGAGTTGGAAGCTATGGAAAATGTTTTGCCTGCAAAGTATGAGGAAGCGAGGGAGGAAGAGAAGTTGCGGACTCAGCGCGAAGATTTTAGTGATTTGGTTGCAGAGAATTCCAAGAAGAGGAAGAGAAAGATGCAAGAGAAGGAGGGAAAGTCAAAGAAGAAAGACTTCAAATTTTAG 1128 0.4601 MTKGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYHEGKEFEVKLREMKPGLLSRDLKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGVLQQEQPNYEEEPVDKTKHWGDLEEEEEEEEEEEEEEEEEEEQEMEEEELQDGIQSVDSLSSTPTGVETPDFIDLRKQQRKDSERPLYEVLEEKEERIAPGTLLGTTHTYVVNTGAQDKSGAKRVDLLRGQKSDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRTQREDFSDLVAENSKKRKRKMQEKEGKSKKKDFKF 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0730 375 Coils Coil 194 227 - -
Lele13g0730 375 Pfam PSP 96 141 IPR006568 -
Lele13g0730 375 MobiDBLite consensus disorder prediction 198 227 - -
Lele13g0730 375 MobiDBLite consensus disorder prediction 247 261 - -
Lele13g0730 375 MobiDBLite consensus disorder prediction 183 197 - -
Lele13g0730 375 Pfam Domain of unknown function (DUF382) 3 87 IPR007180 GO:0005634
Lele13g0730 375 SMART testneu 92 145 IPR006568 -
Lele13g0730 375 PANTHER SPLICING FACTOR 3B 3 375 - -
Lele13g0730 375 MobiDBLite consensus disorder prediction 228 242 - -
Lele13g0730 375 MobiDBLite consensus disorder prediction 181 261 - -
Lele13g0730 375 MobiDBLite consensus disorder prediction 330 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0730 Lele-ChrLele13 19279132 19283319 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0637 14 17774222 17785923 Lele13g0730 13 19279132 19283319 CCT
Lele15g1734 15 10387597 10399732 Lele13g0730 13 19279132 19283319 CCT
Lele16g1772 16 10395349 10409105 Lele13g0730 13 19279132 19283319 CCT
Lele13g0730 13 19279132 19283319 Lele15g1749 15 10507252 10513688 hybridization
Lele13g0730 13 19279132 19283319 Lele16g1785 16 10501485 10502423 hybridization