Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0729 ATGGGTTTGAGTTCTAAGCAGGTATCTAGTAGTGGGATTGATTGGAACCAGACGTTGCTGCAAGATCAGAAGTTGGAGCTTCCGAAGCCTCCTCCATTGATGAGGAAACTGCAACAACAACAACAGAATCAGCAGCATCAACAGATGCAGCAACAACGACAACAATCTCATCATCAGCAAACATCGTCGTCGGAGCCTTTGAAGTGTCCGAGGTGTGATTCGATCAATACCAAGTTCTGTTACTACAACAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGAACCTGCAAGAGGCACTGGACTAAAGGTGGCACTTTGCGCAATGTCCCCTTTGGCGGTGGCCGGAAAAACAAAAGGGTCAAGAAATTATCCACCCCCATCTCTTCCTCCGCCGCCGCCGCAACCTCCGGCATGACAGTTCAGAGTTCCCTGCAAAGGCCGAGTAGTAATCTTAATCTTCCTCCCTCATCCTCTGCCTCTCTCTTTCAGTCTCTGATTCATCCTCCTTCATCACAACCCTCCTTGCTTCTTCCTCATCAGAATCTGATGAACCCCACCAGAGACTTATCGCAAAATAAAGATTTTGGAATTGGGAATTGTCCCACCGGCAGCTTCTTGACTTCGCCGACGACTCTGCCTCTTCTTCCTAATCAAAATCGGAGCTTTATCTTCCCTTTTTCAAGCTCGAGCTCTTTTGAGACTAACCCATGTTCTGTTTCAACCTCTCTAAGATCCTCAAGTGTTTACAATAATAATAATAATAACTTCGGCCAAGAATTGAAGACAACAATGGAAGAGCCAACCCCAACAACACAGACACAGACACAGCCATGGGAGATACCTTCGACAAGCGTAGGAGGTAATACGGAAATGTCAAACTACTGGACTTGGGAGGACCTCGATTCGTTGGTCTCAACTGATCTCAATGTTCCCTGGGATGATTCTGATTTAAAACCCTGA 963 0.4652 MGLSSKQVSSSGIDWNQTLLQDQKLELPKPPPLMRKLQQQQQNQQHQQMQQQRQQSHHQQTSSSEPLKCPRCDSINTKFCYYNNYNKSQPRHFCRTCKRHWTKGGTLRNVPFGGGRKNKRVKKLSTPISSSAAAATSGMTVQSSLQRPSSNLNLPPSSSASLFQSLIHPPSSQPSLLLPHQNLMNPTRDLSQNKDFGIGNCPTGSFLTSPTTLPLLPNQNRSFIFPFSSSSSFETNPCSVSTSLRSSSVYNNNNNNFGQELKTTMEEPTPTTQTQTQPWEIPSTSVGGNTEMSNYWTWEDLDSLVSTDLNVPWDDSDLKP 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0729 320 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 43 266 IPR045174 GO:0003700|GO:0006355
Lele13g0729 320 MobiDBLite consensus disorder prediction 133 153 - -
Lele13g0729 320 MobiDBLite consensus disorder prediction 35 68 - -
Lele13g0729 320 Coils Coil 34 54 - -
Lele13g0729 320 MobiDBLite consensus disorder prediction 21 68 - -
Lele13g0729 320 ProSitePatterns Zinc finger Dof-type signature. 69 105 IPR003851 GO:0003677|GO:0006355
Lele13g0729 320 ProSiteProfiles Zinc finger Dof-type profile. 67 121 IPR003851 GO:0003677|GO:0006355
Lele13g0729 320 Pfam Dof domain, zinc finger 66 119 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0729 Lele-ChrLele13 19271272 19272234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0729 57 137 C2C2-Dof Transcription Factor Family AT5G60850 65.854 8.34e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele13g0729 zf-Dof 1e-30 No_clan