Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0727 ATGGGAGTGGAGGCTCACGAGGCATTGCCTTCATCACGTGAAACTTTATTGCGGGAAAAAGTGGAGGGTCACGAGGCATTGCGGTCAGCACGTGAAGGATCACAAATTGGCAAAAAGCCTGAGAAAGAGGTCCAAGCCGAGTCATTCGCACGTTCATTGCCCTCCTCAAAGGTCACGTATGCAACTGGGATAATGATTTTCATTTGTTCTAAAGATCCTTCTTCTGATGATTTCTTACTTGCCAAGTGCTGTATGAGCATGCAACAAATATCAATGGCTTACAGACGCTGTCTCTTGATAAGAGGAAAACTCATTGATCAGAAATGTCACCCATCTCTAAGTTATCTTTTCCATAGTGATGACCGTAAACGTGAATGCCCAGACGAAAAATTATCTACTGCAGAAGTTGGCCATCTTCTACAAAAAAGGTCATTTGGAAGCTCTATAAACGTATCACCAGGGTTTGCTGTCTCTTCTCAGCATGCAATAAATTCAAACAGTTTCCTTGTCCCATGCTCTGGATATTCTTTTTGCCGATATATGTCTACAATCAATCAGGGCTCTAATGATATTGACTTAACGAGTGATGTAGCAAATTTCCTAACAGACACAACCATGGAGGCTGTTGCTTCTCAGGCTCCTGTACTTAGTGAAGTTGCAGTAGCTGCTGCTGATTCATATTTACCTGTTCAAGCTTTGCAGTATTTCATAGATTATGTGCATACCTACACTGGGTTAAACTGGTGGGCTTCTATTGTTCTAACAACCCTCCTTATTCGAGGTGCAACATTCCCGCTCTTAATAAATCAACTCAAGGCCACCAGTAAGCTTACTCTAATGAGGCCTCACCTGGAGGAGATTAAGCAAGAGATGCAAGATAAGGCTATGGATCCCATGGCGGTTGCTGAAGGTCAAAAGAAGATGAAGAAGGTCTTCAATGAATATGGCGTGAGTCCATTTACTCCATTGAAAGGACTCTTTATTCAAGGTCCTATCTTTGTCAGCTTCTTCCTTGCTATAACAAACATGGCTGAAAAGATGCCATCATTCAAAAATGGTGGAGCCTACTGGTTCCTTGATCTCTCAACACCAGATACCTTGTACATTCTGCCAACTGTGACTGCATTGTCATTCTTAATAACAGTAGAGTGCAATATGCAAGAAGGTATGGAAGGAAATCCTGCTGCTGGCACCATGAAAAATGTCTCCAGGGTTCTTGCTCTTTTTACAGTTCCTTTTACCATGGGATTTCCAAAGGCTATATTTTGTTACTGGATTACATCAAATTTGTTTTCACTTGGGTACGGACTTGGGCTTAAAGTTCCTGGCGTTAAGGAAGCATTACGCATTCCAAAAATACCTGCCGCAGCGCCCACCAGTGCACCACAATCCCCCTTCTCTTTTTTCCCTACGGCAAAGAAAAATTCATCGGTGACGACGGAATCAAACTCAGCACCAGTTGAACAATCGAAGAAACTTCCAGGTCAGAAGATATCTTCTTCATCTGTTATTGGTCAGAGGCTCAGAAGTTTAGAGAAACAAGTGAAAGGAAGAAAGAAGAACAAGAAGGTCTGA 1575 0.4241 MGVEAHEALPSSRETLLREKVEGHEALRSAREGSQIGKKPEKEVQAESFARSLPSSKVTYATGIMIFICSKDPSSDDFLLAKCCMSMQQISMAYRRCLLIRGKLIDQKCHPSLSYLFHSDDRKRECPDEKLSTAEVGHLLQKRSFGSSINVSPGFAVSSQHAINSNSFLVPCSGYSFCRYMSTINQGSNDIDLTSDVANFLTDTTMEAVASQAPVLSEVAVAAADSYLPVQALQYFIDYVHTYTGLNWWASIVLTTLLIRGATFPLLINQLKATSKLTLMRPHLEEIKQEMQDKAMDPMAVAEGQKKMKKVFNEYGVSPFTPLKGLFIQGPIFVSFFLAITNMAEKMPSFKNGGAYWFLDLSTPDTLYILPTVTALSFLITVECNMQEGMEGNPAAGTMKNVSRVLALFTVPFTMGFPKAIFCYWITSNLFSLGYGLGLKVPGVKEALRIPKIPAAAPTSAPQSPFSFFPTAKKNSSVTTESNSAPVEQSKKLPGQKISSSSVIGQRLRSLEKQVKGRKKNKKV 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0727 524 MobiDBLite consensus disorder prediction 1 45 - -
Lele13g0727 524 MobiDBLite consensus disorder prediction 11 45 - -
Lele13g0727 524 Pfam 60Kd inner membrane protein 248 434 IPR001708 GO:0016020|GO:0032977
Lele13g0727 524 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 247 433 IPR028055 -
Lele13g0727 524 MobiDBLite consensus disorder prediction 472 524 - -
Lele13g0727 524 MobiDBLite consensus disorder prediction 472 508 - -
Lele13g0727 524 PANTHER OXA1 198 498 IPR001708 GO:0016020|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0727 Lele-ChrLele13 19253614 19262545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0727 251 524 Chloroplast and Mitochondria Gene Families AT2G28800 22.945 8.14e-08 52.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0727 13 19253614 19262545 Lele16g1787 16 10513715 10524293 hybridization