Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0715 ATGGATAGCACCGATTCATCTTCAGGGTGGCAGCATCCTCAGCTTCCTCCCGGATTCCGATTTCATCCCACCGACGAAGAGCTCGTCGTTCACTACCTCAAGCGAAAAGCCGCCTCCGCTCCACTGCCTGTCGCCATCATCGCCGACGTTGATCTCTACAAGTTCGATCCCTGGGAGCTTCCAAGTAAGGCAGCGTTTGGGGGGCAAGAGTGGTACTTCTTCAGCCCGAGGGATCGCAAGTATCCAAATGGAGCGAGGCCAAACAGGGCAGCCACTTCGGGATATTGGAAAGCTACAGGAACGGACAAGCCGATATTGTCGTCGGACGGACGAAACCAGAAAGTCGGCGTGAAGAAAGCTCTGGTTTTCTACGGCGGGAAGCCTCCAAAAGGCGTTAAAACCAATTGGATCATGCATGAGTATAGGCTCACTGACAACAATTCTTACAATAATAATTCTCCCCCTAAGCCTCTTCCTCTGGCTTCTGATCCTGCCTCACAATCCTCCAAGAAGAACTCGTTAAGGCTTGATAATTGGGTTTTGTGTCGAATATACAAGAAAAGCAACAGTAGTATGAATAATAGTCTGCAAAGGCCGCCATTGATGGAGCAGGAGAGGGAGATTTGTATGGAGGCTGTGCTTCCGAACATCTCAAGTTTATCAATGGCCAACCACCAAAACTCCAACCCTCCATTAGGACTTGAAAACGATGACAACTTGTTAGATGGATTTCTCGGCATCGGTGGCGGAGGAGGAGGAGGAGGAGTTGGTGGTGGTGATTCTCATGATCAACGCTTGCCTGCTTTGAAACGACACCTGCCATCGCCGTTTTGGAACGAGACGACTGTGGGGTCTCCGTCGGGGTCGTCTTCGTCGGGCAAGAGATTCCACGGTGATCTAAACAGCACAGGGATGAGTACTATGTCAGCGGAGGAGAACAGTTCGTTCATTTCTCTGCTGAGCCAGCTTCCTGCTCAGAATACGACGACGTTTCTTGGCTCCGTCGGTGACAGTGTTCTGAGGCAGCAGTTTCCACTCCCAACAAGCCTGAATTGGACCTCATAA 1065 0.5089 MDSTDSSSGWQHPQLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIADVDLYKFDPWELPSKAAFGGQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILSSDGRNQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLTDNNSYNNNSPPKPLPLASDPASQSSKKNSLRLDNWVLCRIYKKSNSSMNNSLQRPPLMEQEREICMEAVLPNISSLSMANHQNSNPPLGLENDDNLLDGFLGIGGGGGGGGVGGGDSHDQRLPALKRHLPSPFWNETTVGSPSGSSSSGKRFHGDLNSTGMSTMSAEENSSFISLLSQLPAQNTTTFLGSVGDSVLRQQFPLPTSLNWTS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0715 354 MobiDBLite consensus disorder prediction 147 171 - -
Lele13g0715 354 SUPERFAMILY NAC domain 8 187 IPR036093 GO:0003677|GO:0006355
Lele13g0715 354 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Lele13g0715 354 Gene3D NAC domain 24 192 IPR036093 GO:0003677|GO:0006355
Lele13g0715 354 MobiDBLite consensus disorder prediction 278 304 - -
Lele13g0715 354 MobiDBLite consensus disorder prediction 275 304 - -
Lele13g0715 354 ProSiteProfiles NAC domain profile. 15 187 IPR003441 GO:0003677|GO:0006355
Lele13g0715 354 PANTHER NAC TRANSCRIPTION FACTOR 56 15 215 - -
Lele13g0715 354 FunFam NAC transcription factor 56 24 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0715 Lele-ChrLele13 19171164 19172428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0715 5 354 NAC Transcription Factor Family AT1G61110 51.923 1.91e-102 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele13g0715 NAM 8.5e-40 No_clan