Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0673 ATGCGGGGTTTCACTTTATATCAACGAGTTTCCAGAGTTTTCCATCAATCCTCCTCCCTTACCAAGTTTCTTGTGCTTTTCACCGTAAGTGGTGGAACAGGGGCCCTTGTGGCATATGCAGAAGCGAATGGAAGCAATAATGGATCATACATTGGTTCTTCATCATCAGAAACAGTTCCGGAAAAGAAAAAGGTGGTGGTGCTGGGAACTGGCTGGGCAGGCACAAGTTTCTTGAGGAGCCTAAACAACCCCAAATACGAAGTTCTGGTGGTTTCACCTCGCAACTATTTCGCATTCACTCCTCTGTTGCCCAGCGTCACTAGCGGTACTATCGAAGCTCGCAGCATTGTTGAACCTATTCGCAATATTTTTAGGAAGAAAAGAATGGAAGTTGAATATAGTGAGGCTGAGTGTCTCAAGATTGATTCAGAAAACAGGAAAATTTACTGTCGATCCAATATAAACAACAATTTGAACGGGAAAGAAGAATTTGTCGTGGACTATGATTACCTAATCATAGCCGTGGGAGCTAATGTCAACACATTTAACACTCCAGGAGTTGAAGAACATTGCCACTTCTTAAAGGAAGTGGAAGATGCCCAGAAAATTAGAAGAACAGTAATTGATTGCTTTGAGAGAGCAAGCTTGCCAAATGTAAGTGATGAAGAGAAGAAGAGGATTCTTCATTTTGCAATCGTTGGAGGTGGCCCAACCGGGGTGGAGTTTGCAGCCTCCCTTCATGACTTTGTCAATGATGATTTGATCAAGTTATATCCTGGGATCAAAGATTTAGTTAAGATCACGCTTCTGGAGGCTGGAGATCATATTCTGAGCATGTTTGACAAGAGAATTACTGCATTTGCTGAAGACAAGTTCAAGAGAGATGGCATTGATGTGAAAACAGGATCCATGGTTGTGAAGGTGTCCGATAAAGAAATTTCTACCAAGGAACTGAAAAATGGTGGGGAGATTACCTCAATTCCATATGGAATGGCTGTGTGGTCAACTGGTGTAGGAACCCGTCCATTTATCAAAGATTTCATGAAGCAAATTAACCAGGCTAACAGGCGTGCTTTGGCTACTGACGAATGGTTGAGAGTTGAAGGGCGTGACAATGTTTATACCCTTGGTGATTGTGCTACCATAAACCAGCGAAAAGTCATGGAAGATGTTGCCGCAATTTTTAAGAAGGCAGATAAAGGCAACTCAGGAACGCTTACGGGGAAAGAATTTCAAGAGGTGATTGACGATATCTGTGAAAGGTACCCTCAGGTGGAGCTATATTTGAAGAGCAAGCAGATGCGAAGCATTGTTGATCTGTTGATGGAAGCGAAGGGAGATGTTAAGAAAGAATCAACTGAACTGAACATCCAAGACTTCAAAGCAGCATTGTCCAAAGTGGATTCCCAGATGAAATTCCTTCCGGCTACAGCACAGGTTGCATCTCAGCAGGGCGCATACTTGGCCAAGTGTTTTAACCGGATGGAGGAGTGTGAAAAGAATCCAGAGGGTCCTCTTAGGTTCAGGGGAGAAGGTCGCCACCGCTTCAAACCCTTTAGGTACAAGCATTTTGGACAATTTGCTCCACTGGGAGGAGAGCAGACAGCAGCACAGCTTCCTGGGGATTGGGTATCAATCGGCCACAGTTCCCAATGCAAGCAAGTTAGCTGGCGTACGAGGGCCTTAGTGGTGTCGGACTGGGCAAGACGCTTTGTTTACGGCAGGGACCCGAGTCGCATCTGA 1743 0.4475 MRGFTLYQRVSRVFHQSSSLTKFLVLFTVSGGTGALVAYAEANGSNNGSYIGSSSSETVPEKKKVVVLGTGWAGTSFLRSLNNPKYEVLVVSPRNYFAFTPLLPSVTSGTIEARSIVEPIRNIFRKKRMEVEYSEAECLKIDSENRKIYCRSNINNNLNGKEEFVVDYDYLIIAVGANVNTFNTPGVEEHCHFLKEVEDAQKIRRTVIDCFERASLPNVSDEEKKRILHFAIVGGGPTGVEFAASLHDFVNDDLIKLYPGIKDLVKITLLEAGDHILSMFDKRITAFAEDKFKRDGIDVKTGSMVVKVSDKEISTKELKNGGEITSIPYGMAVWSTGVGTRPFIKDFMKQINQANRRALATDEWLRVEGRDNVYTLGDCATINQRKVMEDVAAIFKKADKGNSGTLTGKEFQEVIDDICERYPQVELYLKSKQMRSIVDLLMEAKGDVKKESTELNIQDFKAALSKVDSQMKFLPATAQVASQQGAYLAKCFNRMEECEKNPEGPLRFRGEGRHRFKPFRYKHFGQFAPLGGEQTAAQLPGDWVSIGHSSQCKQVSWRTRALVVSDWARRFVYGRDPSRI 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0673 580 Gene3D - 409 579 - -
Lele13g0673 580 Gene3D - 54 408 - -
Lele13g0673 580 PANTHER NADH DEHYDROGENASE 56 580 IPR045024 GO:0003954|GO:0006116
Lele13g0673 580 SUPERFAMILY FAD/NAD(P)-binding domain 62 281 IPR036188 -
Lele13g0673 580 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 53 415 - -
Lele13g0673 580 ProSiteProfiles EF-hand calcium-binding domain profile. 386 421 IPR002048 GO:0005509
Lele13g0673 580 Pfam Pyridine nucleotide-disulphide oxidoreductase 63 390 IPR023753 GO:0016491
Lele13g0673 580 SUPERFAMILY FAD/NAD(P)-binding domain 229 383 IPR036188 -
Lele13g0673 580 PRINTS FAD-dependent pyridine nucleotide reductase signature 65 84 - -
Lele13g0673 580 PRINTS FAD-dependent pyridine nucleotide reductase signature 229 247 - -
Lele13g0673 580 PRINTS FAD-dependent pyridine nucleotide reductase signature 168 186 - -
Lele13g0673 580 SUPERFAMILY EF-hand 343 475 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0673 Lele-ChrLele13 18826808 18829822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0673 1 580 EF-hand Containing Proteins AT4G05020 67.412 0.0 835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0673 13 18826808 18829822 Lele15g1811 15 11009935 11013005 hybridization
Lele13g0673 13 18826808 18829822 Lele16g1839 16 10959567 10962726 hybridization