Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0656 ATGACCTCGCTCAATCCGGCGGAGTATGACGCCGACTCCGTCGCTTCCTCCCCTCGCTCAGAACATTTTCACGAACCCTTGCATCGTGTCCGCTTCATGTGCAGCTTTGGTGGTAGGATATTACCCCGCCCCCATGACAATCAGCTCCGATACGTCGGTGGTGATACCCGAATCGTCGCCGTCCATCGCTCTGTCTCCTTCTCTGCTCTCCTTCTCAGGCTTTCTAAGCTCTCAGGCACTATCGATATAACAGTGAAGTACCAGCTTCCCAATGAGGATCTGGACGCCTTGATTTCAGTGACGACCGACGAGGATGTGGAGAACATGATGGAGGAGTATGAGAGGGTAGCACAGAATCAAAACCCGAGGTCGGCTCGGCTCCGGCTATTTCTGTTCGTTAAGGGAGAAGATTCTAGAACCAACAGTATCAGCTCCCTACTGGACGGCTCTGCCAATCGCGAGAGCTGGTTTGTCGACGCCCTCAACAGCGGCGTAGATCGGCTCGAGCGAGGCCGTTCCGAGGCGTCTTCCATGGTATCTGAAGTGCCTGATTATCTCTTCGGCTTGGAGAACTCCGACGAGGTCCAAACCCGAGAACCAAGGTTGAAACCCCGACAGCTCCTCAACGACACCGTCTCGTGTTCGGATCCTGGTTCCCCCGCTCCTGTTGTTTCATCTCCGTTTTGCTCCACCTCATCGGCTCCAAATGTGCAGTCCATGCCGAACCTCCCACCAGTTAAAACTAAACCGGATAATCCGGTTCCTGTCATGGAGTCCAAAGAACATCACATTGACGGCTTTCAAACCGGAAATCCAGGCGGCCAGATATCTCACTACCCGCCGGATTCTACTTATCCCGGTCATTCTGTACAACCTGTTCCAGTTTACTACATTCCAGGTCATGTTCCGTTTCAACATGGGCAGGTACCAGTTCAGCCGGTGACAATTCAGGCGCCTTATGTTCAGCCATACCCGGCGGTGGTGCCGGCTCAGGTGCCAGTAGGTTATCATCATATGGTTCCAGGTTCGGCCCAAGCATACACGGGAGGGATGATACCCATCGGCGGTGTGCATCCATACGAAGCGGCGGCGATGATGGTCCCAGACGGCATGCAGAGGCAGCACGCATATAAAGCAGTTCCGAATTCCGGCGGCCCCCCTGTTTATCCGGTGATGGCGATGGCAAGTGCGAGTGGGGACGAATCGCAGAGAGGTGGAGCGGAATATGGGACGGGTCGCGGCCCCAGCATGGACTGA 1257 0.5513 MTSLNPAEYDADSVASSPRSEHFHEPLHRVRFMCSFGGRILPRPHDNQLRYVGGDTRIVAVHRSVSFSALLLRLSKLSGTIDITVKYQLPNEDLDALISVTTDEDVENMMEEYERVAQNQNPRSARLRLFLFVKGEDSRTNSISSLLDGSANRESWFVDALNSGVDRLERGRSEASSMVSEVPDYLFGLENSDEVQTREPRLKPRQLLNDTVSCSDPGSPAPVVSSPFCSTSSAPNVQSMPNLPPVKTKPDNPVPVMESKEHHIDGFQTGNPGGQISHYPPDSTYPGHSVQPVPVYYIPGHVPFQHGQVPVQPVTIQAPYVQPYPAVVPAQVPVGYHHMVPGSAQAYTGGMIPIGGVHPYEAAAMMVPDGMQRQHAYKAVPNSGGPPVYPVMAMASASGDESQRGGAEYGTGRGPSMD 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0656 418 CDD PB1_UP2 33 132 - -
Lele13g0656 418 Gene3D - 50 134 - -
Lele13g0656 418 Pfam PB1 domain 45 133 IPR000270 GO:0005515
Lele13g0656 418 PANTHER OS05G0427100 PROTEIN-RELATED 11 347 - -
Lele13g0656 418 MobiDBLite consensus disorder prediction 1 20 - -
Lele13g0656 418 MobiDBLite consensus disorder prediction 396 418 - -
Lele13g0656 418 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 49 134 - -
Lele13g0656 418 SUPERFAMILY CAD & PB1 domains 45 141 - -
Lele13g0656 418 SMART PB1_new 44 134 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0656 Lele-ChrLele13 18647677 18649028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0656 19 132 MAP Kinase Kinase Kinase AT3G46920 49.123 1.21e-31 125