Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0651 ATGGGAAGATCACCGTGTTGTGAAAAGAATGGCCTCAAGAAAGGCCCCTGGACTCCTGAAGAAGACCAGAAACTCATCGATTATATTCAGAAACATGGCTATGGCAACTGGAGGACTCTCCCTAAGAATGCTGGGTTGCAGAGGTGTGGAAAGAGCTGCCGTCTCCGTTGGACCAACTATCTCCGACCAGATATCAAACGAGGTCGTTTCTCTTTCGAAGAGGAAGAAACCATCATTCAGCTTCACAGCATTCTCGGCAACAAGTGGTCGGCGATTGCTTCTCGTTTGCCCGGAAGAACAGACAACGAGATCAAGAACTACTGGAACACTCACATTCGTAAGAGGCTTCTTCGTATGGGAATTGATCCTGTGACTCACTCTCCACGCTTAGACCTCCTGGACCTCTCTTCCATTCTCTATGCTTCTTCCTCTTCTTCTTCTTCCTCACAGATCCACAACATCGATCTTTCAAGCCTGCCAGCTCCTTTACTTAACCCACACCTTCTCAAGCTTGCTTCCTCCCTCCTTTCATCTCAACGAAGAGACCAGAACCTCAACTTCTGCAACAATAATCAACAAAGCCCAGATAATATCTCACTGTTTCATGAAATACAGGCTTTACCTACTGAATCCCAGCCAATGCTACAACCCAATAATGTGGATCCTTATAACATTTCTTCAAACTTCACCGAGTTTGGCGATTGGCAAAACAACAACAACAGCACTGGGAATTCTATGACACAGGACTATGTTCCTGAGTTGTTACCGAGCTTCCAATATTACAGCGCTGATGATCAGTATCAGAATCTCATGGACCTTCAGAACAACAACAAAAACAACTTCAGCTTGGCCTCAGTTCAATCCACGCCGTCTAATTCTAATTCGACGTACATCAATGGCGGATGCAGCAGCACGGAGGATGAGAGAGAGAGCTATAACAGCACCAACATGTTCAATTTTGAAATCCCTGAGATTTTAGATGTTAATGACTTCAATCATGTAATGTTGTAA 1011 0.4471 MGRSPCCEKNGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDLSSILYASSSSSSSSQIHNIDLSSLPAPLLNPHLLKLASSLLSSQRRDQNLNFCNNNQQSPDNISLFHEIQALPTESQPMLQPNNVDPYNISSNFTEFGDWQNNNNSTGNSMTQDYVPELLPSFQYYSADDQYQNLMDLQNNNKNNFSLASVQSTPSNSNSTYINGGCSSTEDERESYNSTNMFNFEIPEILDVNDFNHVML 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0651 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Lele13g0651 336 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele13g0651 336 Coils Coil 336 336 - -
Lele13g0651 336 FunFam MYB-related transcription factor 13 66 - -
Lele13g0651 336 FunFam Transcription factor MYB39 69 130 - -
Lele13g0651 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Lele13g0651 336 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele13g0651 336 Gene3D - 69 116 - -
Lele13g0651 336 Gene3D - 13 66 - -
Lele13g0651 336 SMART sant 66 114 IPR001005 -
Lele13g0651 336 SMART sant 13 63 IPR001005 -
Lele13g0651 336 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele13g0651 336 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele13g0651 336 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 268 - -
Lele13g0651 336 MobiDBLite consensus disorder prediction 285 309 - -
Lele13g0651 336 CDD SANT 16 61 IPR001005 -
Lele13g0651 336 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele13g0651 336 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0651 Lele-ChrLele13 18605433 18606626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0651 1 331 MYB Transcription Factor Family AT4G21440 53.846 1.44e-112 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele13g0651 Myb_DNA-binding 1.6e-16 CL0123