Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0643 ATGTCTTTCCTTGATGGCTCACTTTCCTTTGAAACTGGAGATATTAAGCGTATTTCATCTCTCAAAGTTCTTAGAATATTCATTGAACTTTTGAGAGCAAAAGTAAAGCTGAGGAAGAAGAAGATGCGTGACGGTTTCTGGCTTTCTCTGAAGAGATCAATTCACTGCAAGCCAAACCCATCAGATGTTCATGAACCAGAAGCAACCATCCAACACGGAATTCCTCAGAAGAATTCAAATTCAAAAGATTGCTTCCAAAGAACAAGCAATATGATCTCAGAGAAACCTAGAAGTGGCAACCTAATCAAATCCTTAAGGAGCAGTGATATTCTTAACCCCATAACCCATAAGGTTGTCCTTGACATCTCCAGCAGTGGATTTCGAATTTGTCGATGTTGTTCTAATCGTTCTCGTCCTCTAAGTAAAGGAGTGAGAGGCCCTCATGAATCAAGAACCCCAACAACTACACCTTCGAAGAAGACCCATCATGATGTGGATTGCAATGAATGTAACATATCCTCCTTAAACTCAACGGTTTTGATGCAGACAGATTCTAATAATCGTAATCCTTCAACTTTGGTTTGTCTCAAGTGTGGTGAGAAACTAAAATTTGTTGATGATGCTATTGAAGCACACCATGCCTCCCAGCATTCAGTGATTGAACTTGATGAAGAAGATTCAACAAGGCAGATCATAGAAGCAATATGTAGAACAACAAGCTGTAGTGATAATTCCCAGAACAAGTCAGGGAAGATTGAGTCTGTGCTCAAAGTTCAGAACACCCCAAGAACATTTGCTAGGTTTGAGGAATACAGGGAAATGATAAAGAAAAATGCTGAAAAGTCACACAAGAAGCAACCTCGTTGCCTAGTTGATGGCAATGAGCTTCTAAGGTTCCATGGCACAACCCTCACATGTTCACTGGGCACCAGTAATAATGGCTCTTGTTCTTCTGGTTTGTGCACTTCAGAACGTTGTTGCGTGTGCCAGATTGTAAGACATGGGTCCTTAACCACCAAAGAGTTTCATGGTTCATTTGGGGTTCTCACCACTTCAACTTGTGATAAGGCCCTCGAATCCATAGGGTCAGTTGATTCTCAGAGGAAATCGGTTATGGTGTGCAGAGTAATAGCTGGTAGGGTTCTGTATAGTTCTGTGGAAGAAATTGAAGAAGGGGACAATTCTGGGTTTGATTCTTTGGCAGAGAAGAGAAATAATGGTGATTCAGAGATTGAAGAGCTTTATGTGTTGGATCCTAGAGCTATTCTTCCTTGCTTTGTGGTAATGTACAGACCCTCAATGCTGAGTTCTTGA 1314 0.411 MSFLDGSLSFETGDIKRISSLKVLRIFIELLRAKVKLRKKKMRDGFWLSLKRSIHCKPNPSDVHEPEATIQHGIPQKNSNSKDCFQRTSNMISEKPRSGNLIKSLRSSDILNPITHKVVLDISSSGFRICRCCSNRSRPLSKGVRGPHESRTPTTTPSKKTHHDVDCNECNISSLNSTVLMQTDSNNRNPSTLVCLKCGEKLKFVDDAIEAHHASQHSVIELDEEDSTRQIIEAICRTTSCSDNSQNKSGKIESVLKVQNTPRTFARFEEYREMIKKNAEKSHKKQPRCLVDGNELLRFHGTTLTCSLGTSNNGSCSSGLCTSERCCVCQIVRHGSLTTKEFHGSFGVLTTSTCDKALESIGSVDSQRKSVMVCRVIAGRVLYSSVEEIEEGDNSGFDSLAEKRNNGDSEIEELYVLDPRAILPCFVVMYRPSMLSS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0643 437 MobiDBLite consensus disorder prediction 139 163 - -
Lele13g0643 437 Gene3D - 208 433 - -
Lele13g0643 437 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 47 430 - -
Lele13g0643 437 SUPERFAMILY ADP-ribosylation 219 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0643 Lele-ChrLele13 18552454 18554157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0643 186 432 C2H2 Transcription Factor Family AT5G54630 52.326 8.14e-74 237