Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0606 ATGCATCGAAACGAGAAAGAAGCAAGTCCTGCTGATCTCAAGGGGAGTTTTTGCTTTTTCTTGGTTTTCCCATCTCAGTGGAGTTCCACTTTTTCATGGCGCGAGGGAGGAAAAAAAAAAAATCTTCTCATTTTGGTGCTCGGGAAAGACCTTGAAATTGTTGAAACCATGAACGTAGAGGAAGAGGTTGAGCGACTCAAACAAGAAATCAAGAGGCTTGGCCAGGTCCAACCAGATGGCTCTTACAAGGTCACATTTGGCACACTGTTTAATGATGACCAATGTGCAAATATATTTGAGGCGCTTGTGGGAACGCTAAGAGCAGCGAAGAAGAGGAAAGTAGTGACATATGATGGCGAGCTTCTGCTTCAAGGAGTCCATGATAATGTGGAAATCACGCTCAAGCCAACTGAAGAACCTGTGAAGAGTTAG 432 0.4421 MHRNEKEASPADLKGSFCFFLVFPSQWSSTFSWREGGKKKNLLILVLGKDLEIVETMNVEEEVERLKQEIKRLGQVQPDGSYKVTFGTLFNDDQCANIFEALVGTLRAAKKRKVVTYDGELLLQGVHDNVEITLKPTEEPVKS 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0606 143 Pfam Costars 58 134 IPR027817 -
Lele13g0606 143 PANTHER COSTARS FAMILY PROTEIN ABRACL 57 138 IPR044302 -
Lele13g0606 143 SMART Costars_2 57 135 IPR027817 -
Lele13g0606 143 FunFam costars family protein ABRACL 57 137 - -
Lele13g0606 143 Coils Coil 49 76 - -
Lele13g0606 143 Gene3D Costar domain 57 142 IPR038095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0606 Lele-ChrLele13 18227245 18230488 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0606 13 18227245 18230488 Lele13g0608 13 18236101 18243271 CCT
Lele13g0606 13 18227245 18230488 Lele14g0505 14 16685274 16695851 CCT
Lele13g0606 13 18227245 18230488 Lele15g1875 15 11534931 11542975 CCT
Lele13g0606 13 18227245 18230488 Lele16g1906 16 11491901 11502057 CCT
Lele13g0606 13 18227245 18230488 Lele15g1877 15 11551364 11554537 hybridization
Lele13g0606 13 18227245 18230488 Lele16g1908 16 11505983 11508813 hybridization