Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0603 ATGGTGTCGCAAATAGTTGAGTTGTTGAAGAATGAGATCCCTCTGGAGCAGGAGGCCTTCGTTTTGCCTCAGGATTCTGTCAATGGCCTTGTTCTTGTTGACATCATCAATGGCTTCTGCACTGTTGGTGCTGGAAATCTGGCTCCAACAGAACCGAATATGCAGATTTCAGGGATGATTGAGGAGTCAGAAAGGCTGGCCAGATTGTTCTGTGAGAAGAAACTGCCAATTATGGCGTTTTTGGATTCTCACCACCCAAACAAGCCAGAAGAACCTTACCCTACTCACTGTCTTATTGGCTCTGATGAATCAAACCTGGTTCCAGAATTAAGATGGCTGGAGGGTGAACCCAACGTGACAATAAGGCGTAAAGATTGTTTTGATGGATATTTGGGCTCAATGGAAGAAGATGGCTCTAATGTTTTTGCAGATTGGGTGAAGAACAACAACATCAAAGCTTTGGTGGTTGTAGGAGTGTGCACAGATATATGTGTGCTGGACTTTGTGTGTTCAACCATGTCAGCTAAGAACAGAGGATTTCTGAAGCCTTTGGAGAACGTAGTGGTGTATTCAAATGCATGTGCCACCTTTGATTTCCCTCTTCATGTTGCCAGAAACTTGAAAGGAGCTTTAGCTCATCCTCAGGAGTTTATGCATCATGTGGGTCTGTATATGGCAAAAGAGAGAGGTGCCAAGATTGCCAACCAAGTCTTGTTTGCTGAGGTGGAGCCATGA 735 0.4463 MVSQIVELLKNEIPLEQEAFVLPQDSVNGLVLVDIINGFCTVGAGNLAPTEPNMQISGMIEESERLARLFCEKKLPIMAFLDSHHPNKPEEPYPTHCLIGSDESNLVPELRWLEGEPNVTIRRKDCFDGYLGSMEEDGSNVFADWVKNNNIKALVVVGVCTDICVLDFVCSTMSAKNRGFLKPLENVVVYSNACATFDFPLHVARNLKGALAHPQEFMHHVGLYMAKERGAKIANQVLFAEVEP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0603 244 Pfam Isochorismatase family 29 204 IPR000868 -
Lele13g0603 244 Gene3D - 28 220 IPR036380 -
Lele13g0603 244 PANTHER - 1 241 IPR044717 GO:0008936|GO:0019365
Lele13g0603 244 SUPERFAMILY Isochorismatase-like hydrolases 30 233 IPR036380 -
Lele13g0603 244 CDD cysteine_hydrolases 30 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0603 Lele-ChrLele13 18211324 18213658 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0603 13 18211324 18213658 Lele13g0605 13 18220582 18225758 CCT
Lele13g0603 13 18211324 18213658 Lele14g0503 14 16667227 16673861 CCT
Lele13g0603 13 18211324 18213658 Lele15g1878 15 11556049 11562012 CCT
Lele13g0603 13 18211324 18213658 Lele16g1909 16 11510398 11516930 CCT
Lele13g0603 13 18211324 18213658 Lele15g1880 15 11568083 11570541 hybridization
Lele13g0603 13 18211324 18213658 Lele16g1910 16 11517201 11526645 hybridization