Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0600 ATGGGAGTGGAGAAGCAAATCCTCAGGCCTGGAACTGGTCCCAGGCCAATAGCTGGCCAAAACGTCACTGTTCACTGCACTGGTTTTGGAAAAAACGGAGACCTTTCTCAGAAATTTTGGAGCACCAAGGATCCTGGGCAGCAGCCTTTCACGTTTAAGATTGGCCAAGGTTCTGTTATAAAAGGATGGGATGAAGGTGTGATGGGTATGCAAATTGGTGAAGCTGCTCGTCTGCGGTGCTCTCCTGACTATGCTTATGGTCCTCAAGGTTTTCCTGCTTGGGGAATTATGCCAAACTCTGTCCTGGACTTTGAAATAGAAGTCCTGAGAGCGCAGTGA 339 0.4867 MGVEKQILRPGTGPRPIAGQNVTVHCTGFGKNGDLSQKFWSTKDPGQQPFTFKIGQGSVIKGWDEGVMGMQIGEAARLRCSPDYAYGPQGFPAWGIMPNSVLDFEIEVLRAQ 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0600 112 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 2 111 - -
Lele13g0600 112 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 15 109 IPR001179 GO:0003755
Lele13g0600 112 SUPERFAMILY FKBP-like 2 109 - -
Lele13g0600 112 Gene3D - 1 112 IPR046357 GO:0003755
Lele13g0600 112 FunFam Peptidylprolyl isomerase 1 112 - -
Lele13g0600 112 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 19 112 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0600 Lele-ChrLele13 18198190 18200563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0600 2 110 Calmodulin-binding Proteins AT3G25230 40.909 1.81e-16 71.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0600 13 18198190 18200563 Lele13g0590 13 18118953 18124281 CCT
Lele13g0600 13 18198190 18200563 Lele14g0490 14 16575471 16580437 CCT
Lele13g0600 13 18198190 18200563 Lele15g1893 15 11653150 11658617 CCT
Lele13g0600 13 18198190 18200563 Lele16g1925 16 11614008 11618962 CCT
Lele13g0600 13 18198190 18200563 Lele15g1883 15 11582955 11585755 hybridization
Lele13g0600 13 18198190 18200563 Lele16g1917 16 11558491 11560519 hybridization