Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0585 ATGAGTTGCTTTCTGCAGAAAACTGATAATCATCATGGCTCATCAAGACGGGTAGTAGGGCAAATAATGAGCTTAGAAATGGAAGAAGAAATAACAGATATAGAGGCAGGAGGAGGAGGAGGAGGAGATGGTATCTGTCTGACGTGGCAGGATCTAAAAGTGACAGTGAAAAATGGAAAAGAGAGGTTGAAACATATCCTTCAGGGTCTCACCGGTTATGCCAAGCCAGGACAGCTCTTAGCCATTATGGGTCCTTCCGGTTGTGGCAAGTCCACCCTCCTTGATGCCTTAGCAGGTAGGTTGCGTACAAAGGCAAAGCAGACAGGAGAAATCCTTATCAATGGCGGCAAACAAGCCCTAGCTTATGGAACATCTGCATATCTGACACAAGACGATGCAATATTGACGACATTAACTGTGGGAGAAGCAGTGCACTACTCAGCTCAGCTGCAACTTCCCGATTCGATGACGAAGTCGGAGAAGAAGGAGAGAGCAGACTTCACAATAAGAGAAATGGGTTTACAAGACGCCATTAACACAAGGATTGGAGGTTATGGAGGTTCTAAAGGAATCAGTCGAGGCCAAAAGAGAAGAGTTAGCATTTGCATTGAGATTCTCACAAGGCCAAGTCTTCTGTTCCTTGATGAACCAACCAGTGGGCTTGATAGTGCAGCTTCTTACTATGTTATGAGCAGAATTGCAAGCTTGAATCAGAAGGATGGGATTCAGAGGACTATTATTGCAGCAATTCATCAGCCTAGTAGTGAGGTTTTTGAGCTTTTTCATAACCTTTGTCTTCTGTCTTCTGGTCAAGCTGTCTACTTTGGCCCTGCTTCTGCTGCAAATGAGTTTTTTGCATTAAATGGTTTTCCCTGCCCTACTCTTAAGAGTCCCTCTGATCATTTTGTGAAGATCATCAACAATGATTTTGAGAAGGAGGATCCTGAGCAAGGATTATTAGAAGGACTAACCACAGAAGAAGCAGTTCATATTCTTGTGAAATCATACGAGTCATCTGCAATCAGTCAGCACGTTCAAACGGAAATAGTTAAAATAAGAAGAACAAGGAATTCTAGTGCAATGGAGATGAAAGGCCATGCTTCATTCTTGAGGCAGTGCATCATTCTCACAAGAAGATCATTTCTGAACATGCATCGGGATTTAGGCTACTACTGGTTACGTTTATTTATCTATGGAGGATTGGCCATAACTCTAGGCACTATCTTCTACAATATTAGCTCAAGCGAATTAGCTCAGGTAAGAGGCTCCCTGCTCATGTTTGTGGCCACATTCCTCAGTTTCATAACCATTGGAGGGTTCGCTTCCCTTGTGGAGGACATGAAGGTGTTTCAAAGAGAGAGACTAAATGGGCATTATGGAGTTTCTGCATACACCATTGGACACACATTATCTTGTACTCCATTCTTGCTGTTGATGTCACTGATTCCGGGAGGAATAGTTTATTTCCTAACCGGACTTCATCGAGGCGGTCGGCATTTTCTCTACTTCGCTTCTGTGCTTTTCTTCTCAATAATGTTGGTTGAGAGCTTCATGATGATTGTTGCAAGCATGCTTCCGAATTTCTTGATGGGGATGATCACCGTTGCTGGAATTCTCGGCGTAATGATGTTAACTGGTGGATTCTATCGCCTACCCGAAGAACTCCCGAAATTCCTATGGAAATATCCTTGTTACTACATTTCCATTCACAGGTACGCATACCATGGATTGTTCAAGAATGAGTTTGAAGGTCAGACATTTAGTATTAGTCAAGAGGGGAGGCCTAGGATCATTGATGGGGAAGATATGATGCGAAATTCTTGGCAGATCGATGTCGAGAACTCGAAGTGGATCGATCTTTTGATCCTGGTGGGAATGGCAGTTCTGTACAGAAGTCTGTTCATGATCATTGTCAAGAGCATTGAGAGGTTAAAGCCTATAGTTGCATCTTTCAAATTCAAGTGA 1965 0.4305 MSCFLQKTDNHHGSSRRVVGQIMSLEMEEEITDIEAGGGGGGDGICLTWQDLKVTVKNGKERLKHILQGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLRTKAKQTGEILINGGKQALAYGTSAYLTQDDAILTTLTVGEAVHYSAQLQLPDSMTKSEKKERADFTIREMGLQDAINTRIGGYGGSKGISRGQKRRVSICIEILTRPSLLFLDEPTSGLDSAASYYVMSRIASLNQKDGIQRTIIAAIHQPSSEVFELFHNLCLLSSGQAVYFGPASAANEFFALNGFPCPTLKSPSDHFVKIINNDFEKEDPEQGLLEGLTTEEAVHILVKSYESSAISQHVQTEIVKIRRTRNSSAMEMKGHASFLRQCIILTRRSFLNMHRDLGYYWLRLFIYGGLAITLGTIFYNISSSELAQVRGSLLMFVATFLSFITIGGFASLVEDMKVFQRERLNGHYGVSAYTIGHTLSCTPFLLLMSLIPGGIVYFLTGLHRGGRHFLYFASVLFFSIMLVESFMMIVASMLPNFLMGMITVAGILGVMMLTGGFYRLPEELPKFLWKYPCYYISIHRYAYHGLFKNEFEGQTFSISQEGRPRIIDGEDMMRNSWQIDVENSKWIDLLILVGMAVLYRSLFMIIVKSIERLKPIVASFKFK 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0585 654 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 47 294 IPR003439 GO:0005524
Lele13g0585 654 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 285 IPR027417 -
Lele13g0585 654 FunFam ABC transporter G family member 11 45 335 - -
Lele13g0585 654 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 36 650 - -
Lele13g0585 654 SMART AAA_5 76 266 IPR003593 -
Lele13g0585 654 Pfam ABC-2 type transporter 251 350 IPR043926 GO:0140359
Lele13g0585 654 Pfam ABC-2 type transporter 371 582 IPR013525 GO:0016020|GO:0140359
Lele13g0585 654 Pfam ABC transporter 68 219 IPR003439 GO:0005524
Lele13g0585 654 Gene3D - 47 296 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0585 Lele-ChrLele13 18070389 18078020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0585 65 249 Calmodulin-binding Proteins AT2G36910 25.789 4.21e-08 54.7