Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0573 ATGGCCACAGTCGCCACCACCACTCCACCGTCAGCTCCGCCGCCACAATCCCTAAAATTGGAGTCCCTTGCTCGCATAGACACCACCACTCTGTCCCAGTCCGAGCTTCAAGCGCTCTCTCTCTGCTCTCTCTCCGCCTTCGACCTCCGCTCTACCACCAACCTCGTTTTCCCCCATGTCGACCGTTCACTCTTCAATGAGAGCGCTGGCTCTCGCCGCCAGACCTACTCTCGACCACGCAAACCCCTTTCCCCTTCTGACTCCCCCACAGGCCACCGCCGCCGCGTCGCCGGTCTTCTTCCAACTCCAAAGCCCCCACCTGTCCCCGATGACGACCCGGAAAACTTAGAGAACCGCAAGATTATAGACTATTTGAAGCAATTGATTAGGGAAGACCCTAAATTCGATCAAGTCGAGCTAATCCCACCTTCTGTTACCCATGAAGTTGTGCCGGATTTGGAATTAGGGGGCGGGATGATGGAGAGCGAGGATATGGGGCTGGTGCGGAAGAGGAAGAGGGGGAGGAAGCCCAAAGTGAAGGTGCATTTGAAGGAGTGCTATAGAGAGATGGAGTTTGTGAATAAGGGTGGTGTTCCTATTGATCTTTCTGCTTTGGCGAATACGGACGATCCATTTGCTGAGGAGTTGAGGAAAAGTACTGAGGGGTTGCAGAGTGAAGAACAGCTATTGGGGTTTTTGAGGGATTTGGGAGGACAATGGGGAAGTAGGAGGAAGAAGAGGAAGATTGTGGATGCCGGAGATTTCGGCGATGTACTGCCGGTTGGTTGGAAGCTTCTACTGGGTTTGAAGAGAAAAGATGGACGCGCGTGGATTTATTGCCGCAGATATATCAGTCCTAGTGGAGAACAATTTGTATCTTGCAAAGAAGTTTCTTCATATCTTCAGTCTCTCTTTGGTCACAATGATGCCCAGTTACCAATCAATCGTGGTGGTGAAAATATGCTGATGGACAATAGGGTGACTACTCAAAGTTTTGCAGGTGTTACCCTTGAGGAGCAGGATAAAAGGATGATCATTGCAAATGACTCAGCTCCACCCAGTTCTTCTGAACGTAATGAACGATTGAAGGATGTGACCTTATTGGGAATTGAGAATCTTGCAGATGTGCAAATACATGACCTATTTGAATGTCACAAGTGTAGCATGACATTTGATGAGAAGGATTCTTACTTGCAGCACCTTTTGTGTTTCCACCAAAGGACAACAAGGCGCTATCGACTTGGTTCTTCTGTTGGAGATGGAGTTATAATCAAAGATGGAAAATTTGAGTGCCAGTTCTGCCATAAGGTGTTTCTTGAAAGGCGTCGCTACAATGGACATGTGGGGATCCATGTTAGGAACTATGTGAGGAAAGTTGAAGAATCACCAGGTCAGGTAAATGTTCAAAGGAGAGATAAGTCTCCAATCAAGGAGGATTTGCCTTCAAGGATCTCTAAGATGGATGCGCTAATTGAAATTGCTCAGAACTCTATTATGGAGAATTTTGCAATTGAAACCCTTGGTAATCAGGCTTCCTCTCCTGATAAATTGAATGTAATTTCTCCTACAGAAACTGCTGTTGGTAAGTTAGATCAGGACAAAATTTTTGAGTCTCCCCTCCGTGAACAGCATATGGAAGATAGAGTCAGTTACAAAAATGTGGATCACGATTTGAATCATCAAGGTAGTAAACTTGCGGTCATGGATGAAGAAGTAGAGCGAACTGATGGTAGCAACAAAGTTATAGATGCTAAGATAGAGATCTGCAAGGATTCCATTGGTTTGTCAACTGTAAACGAGCAAAATGTTGATTCATTTGAGAAGTCAAAGATAAAAAATTATGCGGGATTGACTTTTGATGGTTTGGATCAGCCCAGTGTTGATTTGGAAGGAGTTTCACAAAGCTCGTTACTTCCTTCATCTGGCAGTGATACAACCCCTGAAGTTGAAAATAATCAAAATTCTGGTGGCTCTATTACTGTGGAGCAACTTAACCATGATGAAGATATTAGAATTATGAATGAATTCAAAGTTGAATTAGATGGCATAAAAGATGTATCTGTTACGTCTAAAATCAAAGAGACAACATTGCCAACTTCTGAAGACAAAACAGTGTCATCTGAAATTCCAACCCCGTCTGTGTCCAAGAAAAACCTTGAGAATATTGCTGCGGTTATGGGGGAAAACCAATATGGCAGTGTTGAACTCAAACATGATGACATGAGTGGGTCACAGGAATTGAGGTTTGATGAAACAGAAACTTCGGAGTGTGATTTTGCAGATGGTCATCCTTCTCTTTCTCTGCCACACGTGCCAACAGTTTTGGCAAACAACACACAGATGGAAGAAGGGGCTTGTGCTTCCTCAGTTCAGGCTGAATCTCAAGAAGCAGGAAGACATCAGATTAGAACATCGTGTGTATGGTGTGGTATGGTGTTTGATTATGATGCTGTTGATTCTGAAATACAACCAGATTCTGTTGGATTCATGTGCGCTGCTTGTAAGGCCAAAATATCTGGTCAAATCGATGTGTTGGACAGTGGAGATCACCCTTGA 2556 0.4464 MATVATTTPPSAPPPQSLKLESLARIDTTTLSQSELQALSLCSLSAFDLRSTTNLVFPHVDRSLFNESAGSRRQTYSRPRKPLSPSDSPTGHRRRVAGLLPTPKPPPVPDDDPENLENRKIIDYLKQLIREDPKFDQVELIPPSVTHEVVPDLELGGGMMESEDMGLVRKRKRGRKPKVKVHLKECYREMEFVNKGGVPIDLSALANTDDPFAEELRKSTEGLQSEEQLLGFLRDLGGQWGSRRKKRKIVDAGDFGDVLPVGWKLLLGLKRKDGRAWIYCRRYISPSGEQFVSCKEVSSYLQSLFGHNDAQLPINRGGENMLMDNRVTTQSFAGVTLEEQDKRMIIANDSAPPSSSERNERLKDVTLLGIENLADVQIHDLFECHKCSMTFDEKDSYLQHLLCFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFLERRRYNGHVGIHVRNYVRKVEESPGQVNVQRRDKSPIKEDLPSRISKMDALIEIAQNSIMENFAIETLGNQASSPDKLNVISPTETAVGKLDQDKIFESPLREQHMEDRVSYKNVDHDLNHQGSKLAVMDEEVERTDGSNKVIDAKIEICKDSIGLSTVNEQNVDSFEKSKIKNYAGLTFDGLDQPSVDLEGVSQSSLLPSSGSDTTPEVENNQNSGGSITVEQLNHDEDIRIMNEFKVELDGIKDVSVTSKIKETTLPTSEDKTVSSEIPTPSVSKKNLENIAAVMGENQYGSVELKHDDMSGSQELRFDETETSECDFADGHPSLSLPHVPTVLANNTQMEEGACASSVQAESQEAGRHQIRTSCVWCGMVFDYDAVDSEIQPDSVGFMCAACKAKISGQIDVLDSGDHP 851
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0573 851 ProSitePatterns Zinc finger C2H2 type domain signature. 431 451 IPR013087 -
Lele13g0573 851 ProSiteProfiles Zinc finger C2H2 type domain profile. 429 456 IPR013087 -
Lele13g0573 851 ProSitePatterns Zinc finger C2H2 type domain signature. 384 405 IPR013087 -
Lele13g0573 851 SUPERFAMILY DNA-binding domain 257 304 IPR016177 GO:0003677
Lele13g0573 851 SMART c2h2final6 429 451 IPR013087 -
Lele13g0573 851 SMART c2h2final6 382 405 IPR013087 -
Lele13g0573 851 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 1 607 IPR037472 -
Lele13g0573 851 MobiDBLite consensus disorder prediction 632 659 - -
Lele13g0573 851 Gene3D Classic Zinc Finger 358 457 - -
Lele13g0573 851 MobiDBLite consensus disorder prediction 68 117 - -
Lele13g0573 851 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 249 321 IPR001739 GO:0003677
Lele13g0573 851 MobiDBLite consensus disorder prediction 68 84 - -
Lele13g0573 851 ProSiteProfiles Zinc finger C2H2 type domain profile. 382 410 IPR013087 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele13g0573 Lele-ChrLele13 17904008 17908169 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele13g0573 None None None