Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0572 ATGGCAAGCCATAAAGAGAATACTAAGCAACAAACACTTGAAGCAATGCTGAAATACAAGAAGTTCAGAAAGCTAAATAAAGGGGAGGCACTAATGATCTGCCGCGAACTCGAAGGAACCATCAATGATGTTGTGAACATGAGGGAGCTTCTGGTGAAGGTTTTTGACTTTCCTACTGAATGCATACATGTGCTCACAGGACATGGCATTCAACACATAGATTCCAAAGAAGATGGGATAGATGGGATGGATGAAAGCATTTATCCTGTCGATTTCTTGCGAGAAGGCGCGATTCTCGATGATGATATAAATTCAATCTTTGTTTGGCCCCTCAAAGAAGGTGTCACACTTCATGCCATTGTTGATGCTTGTCATAGTGGAACAATTCTTGATCTATCATATGTCTATGACCATCTAAAATGCATATGGAAAGATAACAAGCCTCCTGCCAAAGAACCTTCTAGAAAGCATCCGAATGGGGGGCTGGCAATTTGTATCAGTGCTTGTGAAGATCATCAGATGGCTGCTGATACCTCAATTGGGAAGGAAATTGAAGAGACTAAGCGAAATTTTTGTCCATCTCTTTTGCGAAATATGTTTCCTCTCAACATTGAGCAGGTTGGCATTGTTCTTCTTTCTATGCTTAACTCTTTCATTTGA 660 0.4061 MASHKENTKQQTLEAMLKYKKFRKLNKGEALMICRELEGTINDVVNMRELLVKVFDFPTECIHVLTGHGIQHIDSKEDGIDGMDESIYPVDFLREGAILDDDINSIFVWPLKEGVTLHAIVDACHSGTILDLSYVYDHLKCIWKDNKPPAKEPSRKHPNGGLAICISACEDHQMAADTSIGKEIEETKRNFCPSLLRNMFPLNIEQVGIVLLSMLNSFI 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0572 219 Pfam Caspase domain 66 181 - -
Lele13g0572 219 Gene3D - 65 207 - -
Lele13g0572 219 PANTHER METACASPASE-4 36 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0572 Lele-ChrLele13 17899724 17901788 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0583 13 18053617 18058717 Lele13g0572 13 17899724 17901788 CCT
Lele13g0572 13 17899724 17901788 Lele15g1913 15 11875892 11878254 hybridization
Lele13g0572 13 17899724 17901788 Lele16g1940 16 11772540 11777349 hybridization