Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0564 ATGTATGAAGGAGATGCTGATGGGTCAGATTCAGCAAGAGACAGTTTCCTCCAAGTTTTTGAAAGGAAGATGGAGGAAAAACACAGACAGTTGAAAGAAAGTGGGCGAGAGTTAGCTGTTTCCTGGGCTCTATGTGCTGTCTGCCTTGTTGGCCATCTTTCTCATTTCCTTGGAGGGAAGGCACCTTGGATCCATGCATTTCATTCCACTGGCTTTCACCTATCCCTGTCTTTGTTTACATTGGTTGGTCCAGGGCGTCAACTTATTCTTGATGGCATAAGAAGCCTTGTTAAAAAGGCACCAAACATGAACACATTAGTTAGTCTTGGGTCTTTGTCATCATTTGCTGTCAGCCTATTTGCTGCCTTGCTGCCCCAATTGGGCTGGAAGGCTTTCTTTGAGGAACCAATTATGCTAATCGCATTTGTCTTGTTAGGAAGGAATCTGGAACAGAGAGCTAAAATTAAAGCAACCAGTGATATGACTGGACTTTTGAGTATATTGCCATCAAAAGCTCGCCTTCTGGTTAGCAATGACACTAAGGAGTTTGACTCAAGTGTTGAAGTTCCTTCTAACAGTCTTTCTGTTGGAGACCGAATTCTTGTGCTTCCTGGAGATCGTATTCCAGCAGATGGAATTGTCAGAACTGGTAGAAGCACTGTAGATGAGTCAAGTTTTACTGGAGAGCCTCTACCAGCAACAAAACTACCTGGGAATCAGGTTTCTGCTGGGAGTATAAATCTAAATGGCACTCTTACAATTGAAGTGCAGAGACCAGGCAGTGAGACTGTCATGGGAGACGTTGTTCGTCTGGTTGAAGAAGCACAGAGTAGGGAAGCTCCAGTTCAACGTTTGGCTGACAAGGTTTTCTTATTGAATCTTTTATCACTTTTATGGCCATCTTATTATGTTTCTGCAATAAGGAGTCTGGCTAAATTCAGTCTGGCTAAGATGTCTAAAATGGTGGCTGGACACTTCACTTATGGAGTAATGGCAGCTTCTGCAGCCACATTTACATTCTGGAGTCTTTTTGGCACACGCGTTCTACCTGCTTCTCTTTATCAAGGAAGTGCAGTTTCTTTGTCATTGCAACTTGCTTGCAGTGTTCTGATCAAGTGCTTTTTGACATGAGAAACTGGGCATTTATTATTGGAAATTACTTACAGTAAGTTTACACAGGTTGTTGCTTGTCCATGTGCACTTGGGTTGGCCACACCTACAGCTGTGCTGGTTGGAACTTCTTTGGGAGCTACTAAAGGATTACTTTTACGGGGTGGAAACATTCTGGAGAAGTTTTCAATGGTAGATGCTGTTGTATTTGACAAAACAGGGACCTTGACAATTGGTAGACCAGTTGTGACAAAGATTGTCGATGCAAGTGGCCAAAACAAAAACTTAAGGCAAACTGCAGACAATGATTGGCCCGATGTTGAAGTTCTGAGATTAGCAGCTGGAGTTGAATCAAATACAGTGCATCCAATTGGTAAAGCAATTGTAGAAGCTGCTCAGGCAGTTAATTGTCATAATGCAAAGGTGCTCATCTTATTGTTTGATTCTTTTAAGGTAGCAGATGGAACATTTTTGGAAGAACCTGGGTCTGGTGCAGTAGCAATTATTAATAACAATAAGGTTTCGATCGGGACTTTGGAATGGCTCATCAGGCAGGGAGTTAACAAAAATATTCATCAAGAAGTTGAGGACTATAGAAATCAGTCTGTTGTTTATGTGGGAGTAAATGATACTGTAGCTGGCCTTGTATATTTTGAAGACCAGATAAGGGAAGATGCAAGACATGTGCTATCTGGAGTGAAGCCAGATGACAAAAAGAAGTTTATAAATGAACTCCAGAAAGATCAGAAAGTTGTTGCTATGGTTGGCGATGGGATCAATGATGCTGCCGCCTTGGCTTCGTCACATATTGGTATTGCATTAGGTGGAGGTGTTGGAGCTGCTAGTGAGGTGTCTTCTATTGTACTTATGGGCAACAGGCTTTCCCAGCTGCTTGATGCATTGGATCTTAGCAGACTTACAATGAAGAGTGTGAAACAAAATCTTGGGTGGGCTTTCCTATACAACATTGTTGGAATTCCAATTGCAGCTGGATTTTTACTTCCAGTAAGTGGGACCATGTTGACTCCGTCAATTGCAGGGGCTCTTATGGGCTTGAGTTCCATTGGGGTAATGACGAACTCGTTGCTTTTAAGATACAGATTTTCCACAAAGCAAAAACAAATCCATGGGACATCCCCGACAATCGAAACCCATGCCAATAGCGTTCTTGCCCAGAAAGAGAAATTAAAATATGGACAGTAA 2313 0.4228 MYEGDADGSDSARDSFLQVFERKMEEKHRQLKESGRELAVSWALCAVCLVGHLSHFLGGKAPWIHAFHSTGFHLSLSLFTLVGPGRQLILDGIRSLVKKAPNMNTLVSLGSLSSFAVSLFAALLPQLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSILPSKARLLVSNDTKEFDSSVEVPSNSLSVGDRILVLPGDRIPADGIVRTGRSTVDESSFTGEPLPATKLPGNQVSAGSINLNGTLTIEVQRPGSETVMGDVVRLVEEAQSREAPVQRLADKVFLLNLLSLLWPSYYVSAIRSLAKFSLAKMSKMVAGHFTYGVMAASAATFTFWSLFGTRVLPASLYQGSAVSLSLQLACSVLIKCFLTXETGHLLLEITYSKFTQVVACPCALGLATPTAVLVGTSLGATKGLLLRGGNILEKFSMVDAVVFDKTGTLTIGRPVVTKIVDASGQNKNLRQTADNDWPDVEVLRLAAGVESNTVHPIGKAIVEAAQAVNCHNAKVLILLFDSFKVADGTFLEEPGSGAVAIINNNKVSIGTLEWLIRQGVNKNIHQEVEDYRNQSVVYVGVNDTVAGLVYFEDQIREDARHVLSGVKPDDKKKFINELQKDQKVVAMVGDGINDAAALASSHIGIALGGGVGAASEVSSIVLMGNRLSQLLDALDLSRLTMKSVKQNLGWAFLYNIVGIPIAAGFLLPVSGTMLTPSIAGALMGLSSIGVMTNSLLLRYRFSTKQKQIHGTSPTIETHANSVLAQKEKLKYGQ 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0564 770 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 601 704 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele13g0564 770 Pfam E1-E2 ATPase 168 291 - -
Lele13g0564 770 Gene3D - 600 675 IPR023214 -
Lele13g0564 770 FunFam Copper-transporting ATPase 1, putative 154 276 - -
Lele13g0564 770 PRINTS P-type cation-transporting ATPase superfamily signature 439 453 - -
Lele13g0564 770 PRINTS P-type cation-transporting ATPase superfamily signature 222 236 - -
Lele13g0564 770 PRINTS P-type cation-transporting ATPase superfamily signature 648 660 - -
Lele13g0564 770 PRINTS P-type cation-transporting ATPase superfamily signature 625 644 - -
Lele13g0564 770 Pfam haloacid dehalogenase-like hydrolase 601 637 - -
Lele13g0564 770 Pfam haloacid dehalogenase-like hydrolase 435 600 - -
Lele13g0564 770 Gene3D - 153 276 - -
Lele13g0564 770 Gene3D - 430 599 IPR023214 -
Lele13g0564 770 FunFam Copper-transporting ATPase PAA1 chloroplastic 450 592 - -
Lele13g0564 770 Gene3D - 450 592 IPR023299 GO:0000166
Lele13g0564 770 Coils Coil 17 37 - -
Lele13g0564 770 SUPERFAMILY Calcium ATPase, transduction domain A 185 272 IPR008250 -
Lele13g0564 770 CDD P-type_ATPase_HM 38 733 - -
Lele13g0564 770 ProSitePatterns E1-E2 ATPases phosphorylation site. 441 447 IPR018303 -
Lele13g0564 770 PANTHER ATP7, ISOFORM B 23 600 - -
Lele13g0564 770 SUPERFAMILY HAD-like 438 731 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0564 Lele-ChrLele13 17837723 17845448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0564 94 735 Primary Pumps ATPases AT1G63440 33.333 2.50e-95 317