Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0552 ATGCTCGAAGCAAGAAGGTGCTATGCTTTTTGTAACCTTGGGGAATTTCTTGGCTTCAACTTGATGACTAGAGGTCCAACAACAAGGCTTGAAGAAGCAATCTGTAATCTGTCTACTGTCTTATTTTCTCAAGAAAAGTTTCAGAGTCAAGAAGAAATGGCAGGTGCTATGTTGAATGGGTTGGGTTCTTCCTTCTTGTGTGGAGGAAAGAGAAGCCAATCTCTTTTCTCTGCTAAATCTAATAATAACAATGCTGTTAGCTCTAAGAGGTTCTTTGTTGCTGCTGCTGCTGCCGCTCAACGCAAGAAATCTTGGATCCCTGCTGTTAAAGGTGGTGGCAACTTCATCGACCCTGAATGGCTAGATGGCTCGCTGCCAGGGGACTATGGCTTTGACCCTCTTGGCCTAGGCAAGGATCCAGCATTCCTTAAGTGGTACCGAGAAGCAGAGCTCATCCACGGCCGGTGGGCGATGGCGGCGGTTGTCGGAATCTTTGTTGGGCAGGCATGGAGTGGAGTTCCCTGGTTTGAGGCTGGAGCTGACCCGAATGCCATCGCTCCTTTCTCCTTTGGTTCACTTCTGGGCACACAGTTGCTGCTCATGGGTTGGGTAGAGAGCAAGAGGTGGGTGGACTTCTTCAATCCTGATTCACAATCAGTGGATTGGGCCACGCCATGGTCTAGAACAGCCGAGAACTTCGCCAACGCTACCGGAGAGCAGGGTTATCCCGGAGGCAAATTCTTTGATCCATTAGGGTTTGCAGGCAAAATCAAGGATGGGGTTTACATTCCTGACACAGAAAAGCTGGAAAGACTCAAACTTGCTGAGATCAAGCATGCTAGGATTGCTATGTTGGCTATGCTTATCTTCTACTTTGAAGCTGGACAAGGCAAAACACCCCTTGGTGCTCTTGGCTTGTAA 921 0.4853 MLEARRCYAFCNLGEFLGFNLMTRGPTTRLEEAICNLSTVLFSQEKFQSQEEMAGAMLNGLGSSFLCGGKRSQSLFSAKSNNNNAVSSKRFFVAAAAAAQRKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVDWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGKIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0552 306 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 90 304 IPR001344 GO:0009765|GO:0016020
Lele13g0552 306 Pfam Chlorophyll A-B binding protein 118 294 IPR022796 -
Lele13g0552 306 SUPERFAMILY Chlorophyll a-b binding protein 114 306 - -
Lele13g0552 306 FunFam Chlorophyll a-b binding protein, chloroplastic 118 305 - -
Lele13g0552 306 Gene3D Chlorophyll a/b binding protein domain 118 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0552 Lele-ChrLele13 17766741 17768610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0552 53 306 Chloroplast and Mitochondria Gene Families AT1G15820 81.102 1.40e-152 426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g1964 16 11976261 11979432 Lele13g0552 13 17766741 17768610 CCT
Lele13g0567 13 17859346 17870802 Lele13g0552 13 17766741 17768610 CCT
Lele13g0552 13 17766741 17768610 Lele13g0552 13 17766741 17768610 ECH
Lele13g0552 13 17766741 17768610 Lele15g1931 15 12027440 12028672 hybridization
Lele13g0552 13 17766741 17768610 Lele16g1961 16 11936236 11939630 hybridization