Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0551 ATGAATATTTCATCTTCAGGCTTATCGTCATCATCTTCTTCAGTTCTTCCACTGTCGAACAAATGGTTATCATCATCATCAAGGCCTGCGAGAGTTTCTGTGATTTCATGTTCTTCTTCAACCACCACCATGAATACTACTGGTAATAAGACCTGCAACTTCTACAAGCTTCTGTCTCTGAGCTCAGAGGCTGCATCCATGACGGAGATCAAGCAGGCTTACCGGTCTATGGCGCTTCGGTACCACCCCGACGTGTGCCGGGACACCACCGCAAAGGAGGAGTCGACGAGGCTGTTTGTGCAGCTTAATACTGCGTATGAGACGCTGTCAAATCCTCAGCTTCGTCAAGAGTATGACTACAACGTTCTGGGATTGCGGAGGATGATGGCGGCGCCAGCGACTGTTGAGATCAGAAATGATGAGATCGGGTTGAGAAAGAGTAGGTCTGAGGACCAGAAGAGATCAAGATCTAACAGAAGTTCGATGAGAAGTCAAAGAATGAAACATCGCAATTGA 516 0.4729 MNISSSGLSSSSSSVLPLSNKWLSSSSRPARVSVISCSSSTTTMNTTGNKTCNFYKLLSLSSEAASMTEIKQAYRSMALRYHPDVCRDTTAKEESTRLFVQLNTAYETLSNPQLRQEYDYNVLGLRRMMAAPATVEIRNDEIGLRKSRSEDQKRSRSNRSSMRSQRMKHRN 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0551 171 PRINTS DnaJ domain signature 56 74 IPR001623 -
Lele13g0551 171 PRINTS DnaJ domain signature 74 89 IPR001623 -
Lele13g0551 171 PRINTS DnaJ domain signature 94 114 IPR001623 -
Lele13g0551 171 MobiDBLite consensus disorder prediction 142 158 - -
Lele13g0551 171 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 10 152 - -
Lele13g0551 171 MobiDBLite consensus disorder prediction 142 171 - -
Lele13g0551 171 SMART dnaj_3 52 114 IPR001623 -
Lele13g0551 171 ProSiteProfiles dnaJ domain profile. 53 122 IPR001623 -
Lele13g0551 171 CDD DnaJ 53 111 IPR001623 -
Lele13g0551 171 ProSitePatterns Nt-dnaJ domain signature. 99 118 IPR018253 -
Lele13g0551 171 Pfam DnaJ domain 53 119 IPR001623 -
Lele13g0551 171 Gene3D DnaJ domain 39 142 IPR036869 -
Lele13g0551 171 SUPERFAMILY Chaperone J-domain 42 118 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0551 Lele-ChrLele13 17744728 17745243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0551 50 119 C2H2 Transcription Factor Family AT1G74250 40.278 3.00e-07 47.4