Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0550 ATGGAGGAAATAGGAAGAGGTAATAATGGTTCAAGTCACATGAATGAAGATCATACTTTGAATATTCAAAAGGTGGGAGCTCCTCCAAAGCAAAAGCTTGTGAAGGAGATTAAAGATGCAGCAAGGGAGACTTTCTTCTCAGACAATCCTTTTCGCCATTTTAAAGACCAGTCAAGATCAAGGAAGCTTGTTCTTGGACTTCAAGCAGTTTTCCCAATCCTTGAATGGGGAAGAGATTACAGTTTTCATAAATTCAGAGGTGATCTTGTCTCTGGACTTACCGTTGCTTCTCTCTGTATTCCTCAGGATATTGCATATGCAAAGCTTGCAAATCTGGATCCTCAATATGCACTATACTCAAGCTTTGTGACTCCTCTGGTGTATGCTTTCATGGGAAGCTCAAGAGATATTGCCATAGGACCAGTTGCTGTTGTGTCCCTCTTGCTTGGAAGCATGCTCACTGATGAGATTAGTGACTATAAGAATCATGATTATCTCCGTCTGGCTTTCACTGCCACCTTCCTTGCAGGAATCACTCAACTGGCCCTAGGGATTTCCAGACTAGGTTTCTTGATTGATTTCCTATCTCAAGCTGCCATAGTGGGATTCATGGCTGGAGCTGCCATTACTATTAGCCTGCAACAGCTCAAAGGGCTACTTGGCATTGTCCATTTCACCAAGAAGACCGATATCATTTCCGTCCTGCACTCAGTTTTTAGTACATCACACCATGGGTGGAACTGGCAGACTATAGTCATAGGAGTATCATTCTTGATCTTCCTTCTAGCAAGCAAGCAAATGGCTAAAAAGAACAAGAAGTTCTTCTGGCTGTCTGCAACTGCTCCACTGATCTCTGTTGTACTGTCAACCTTATTCGTCTATATTACTCACGCTGACAAAAAAGGCGTCTCGATTGTGAGGCATATAAAAAAAGGTGTGAACCCAATATCAGCTAACGAAATATTCTTCAGTGGGAAGTATCTTGGCCCCGGCATTCGGATTGGTGTCGTGTCTGGTGTGATAGCACTCACGGAAGCCATAGCAATTGGGAGAACTTTTGCTGCCATGAAAGACTATTCACTTGATGGAAACAAGGAAATGGTGGCAATAGGAACAATCAATGTTATTGGATCACTTACTTCTTGTTATGTATCTTCAGGATCTTTTTCTCGCTCGGCGGTGAACGTCATGGCTGGTTGTAACACTGCTGTGTCAAACATAGTTTTGTCCATAGTTGTATTGCTAACTCTGGAACTCATTACACCATTGTTCAAGTGCACCCCAATTGCTGTGCTGTCTTCCATTATCATTGCTGCTGTAAGTGGCCTTGTGGACACAGAAGCTGCTGTTCTGCTTTGGAAAGTTGACAAATTTGACTTTGTCACATGCATGGGAGCCTTCCTTGGTGTCATTTTCAAGAATGTTGAGATTGGCCTTCTTATTGCATTTGGAGACCATTTCTTATCGAATGCTTGTTTGGTTGCCTTCGTTCAACTGGGTTTTGTCCCTCAAACTCAGTATTTTCCAAAGGTGGTTATATCTTTTGCAAAGATCCTTTTACAAGTAACAAGGCCAAGAACAGCAGTGCTTGGGAGGGTTCCAGAAACTTCAGTTTATAGGAACATTCAACAATATCCAAAAGCAACACAGGTTCCTGGAATGCTGATTATCAGAGTTGATTCTGCAATCTACTTCTCAAACTCCAACTACATTAAGGAGAGAATTCTGAGATGGCTCACTGATGAAGATGCAAACAAGAAAGAAAACAAACTACCCAGAACAGAATATCTTGTTGTAGAAATGTCTTCTGTAACTGACATTGACACTAGTGGCATTCGTGCCTTTGAAGAGTTGTACAAGAGCCTTCAGAAGAGAAAGGTCCAGGTAAATTCTTCTTCTTTAGTAATGGAGAAGCTTCAGGCATCAAAATTCACAGACTTAATTGGGGAAGATAACATTTTTCTTACAGTGGCTCATGCTGTTGCTACCTTTGGTCCCAACATTGAATTACCCTAA 2016 0.4177 MEEIGRGNNGSSHMNEDHTLNIQKVGAPPKQKLVKEIKDAARETFFSDNPFRHFKDQSRSRKLVLGLQAVFPILEWGRDYSFHKFRGDLVSGLTVASLCIPQDIAYAKLANLDPQYALYSSFVTPLVYAFMGSSRDIAIGPVAVVSLLLGSMLTDEISDYKNHDYLRLAFTATFLAGITQLALGISRLGFLIDFLSQAAIVGFMAGAAITISLQQLKGLLGIVHFTKKTDIISVLHSVFSTSHHGWNWQTIVIGVSFLIFLLASKQMAKKNKKFFWLSATAPLISVVLSTLFVYITHADKKGVSIVRHIKKGVNPISANEIFFSGKYLGPGIRIGVVSGVIALTEAIAIGRTFAAMKDYSLDGNKEMVAIGTINVIGSLTSCYVSSGSFSRSAVNVMAGCNTAVSNIVLSIVVLLTLELITPLFKCTPIAVLSSIIIAAVSGLVDTEAAVLLWKVDKFDFVTCMGAFLGVIFKNVEIGLLIAFGDHFLSNACLVAFVQLGFVPQTQYFPKVVISFAKILLQVTRPRTAVLGRVPETSVYRNIQQYPKATQVPGMLIIRVDSAIYFSNSNYIKERILRWLTDEDANKKENKLPRTEYLVVEMSSVTDIDTSGIRAFEELYKSLQKRKVQVNSSSLVMEKLQASKFTDLIGEDNIFLTVAHAVATFGPNIELP 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0550 671 SUPERFAMILY SpoIIaa-like 546 665 IPR036513 -
Lele13g0550 671 CDD STAS_SulP_like_sulfate_transporter 545 657 - -
Lele13g0550 671 ProSiteProfiles STAS domain profile. 544 664 IPR002645 -
Lele13g0550 671 Pfam Sulfate permease family 85 464 IPR011547 GO:0016020
Lele13g0550 671 TIGRFAM sulP: sulfate permease 72 483 IPR001902 GO:0016020|GO:0055085
Lele13g0550 671 FunFam Sulfate transporter 31 524 667 - -
Lele13g0550 671 PANTHER SULFATE TRANSPORTER 36 662 IPR001902 GO:0016020|GO:0055085
Lele13g0550 671 Pfam STAS domain 545 660 IPR002645 -
Lele13g0550 671 Gene3D STAS domain 524 665 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0550 Lele-ChrLele13 17738357 17744439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0550 12 668 Inorganic Solute Cotransporters AT1G22150 65.658 0.0 843
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0550 13 17738357 17744439 Lele13g0550 13 17738357 17744439 ECH
Lele13g0550 13 17738357 17744439 Lele15g1934 15 12066706 12073007 hybridization