LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele13g0547	ATGAATGTTTACAGTCATTTATCAAAATTGGTCTATCCTGTCATAATAACTAGATTTTACTTCCGGGGTGATATGGCAGTGAAAGTGGTATTTTTCTTATGCCTTTCTTTAACTTGCTTCCATATCAATGGTGCTGCTGTTGCCATGATAGCAGAGGAGAAACGAGCTCTGCTTCAGACCAAATGTCATAACAAATTCAATGGAACATTACCATCTGACAAATGCATTTTACCTTCACGATGTAACATTGATTTGAGCTACAATAATATCTTTGGAAGTATACCCAGAGAACTTGGTAGACTGGAGTCCATCAACTTGTCATACAATAATCTCAGCGGCTATGTTCCAAGTGAAGTTTATATCACTTTTCCTCATGACGTTTTATATGGCAATAAAGAATTACTTGGTTCAAAGAAGATGCATGATTCTTCATATTTGTTGAAAATCATTATTCCTTTAACAAGTTTTCTTGTCATCATATTTGTTACCAGTTTCATCTTATTTCAATCTTTCAAAAAAAACAAGAAAACCACAATTGGGACGAGAGAACCAAAAAATGGGGATTTGTTTTCCATATGGAATTATGATGGAAAAATTGCGTATGAAGATATCATTGAAGCGACAGAGGACTTTGACATCAAATACTGTATTGGAACTGGCGCCTATGGAAGCGTTTATAGAGCACGACTTCCTACTGGTAGAATTGTGGCACTGAAAAAACTTCATAGAAGAGAATATGAAAATCAATCTTTTGCCAAGAGCTTTCAGAATGAAGTGAAGATGTTAAGTGAAATTCGACACCGCAATATTATAAAGCTCCACGGTTTTTGTTTGCATAATCAATGCATGTTTCTGATATATGAATACATGGAGAGAGGAAGCCTTTTTTATGTGTTGAATAATGATGAAGAAGCAAAAGAGTTGGATTGGAGTAAGAGGGTGAATGGCATTAAAGGAATAACAAATGCTCTGTTCTACATGCATCATCATTGTGCTCCTCCAATTATCCATAGAGACATAACAAGTAGCAATGTATTGCTGAACTCAACGATGGAGGCTCTTGTATCAGACTTTGGTACAGCCAGAATCATAGATCCAGATACTTCTAATCAAACTCTTGTAGTTGGTACTTATGGTTATGTTGCTCCAGAGCTTGCATACACTCTAGTTGTGACTGAAAAGTGTGATGTTTATAGTTTTGGAGTGGTTACACTGGAAACAATAATGGGAAGACATCCTGGAGATTTGATATCATCTCTGTCAAAGACCTGTAATGAAAGTATTTTGCTAAAAGATGTCTTAGATGCACGTCTTCCGATGCCAAAACGGAGAGATGCAGGAGATGTGACACTTTTGGTGACAATAGCATTAGCATGCTTGAATCCATCTCCCAAATCTCGACCGTCAATGCAACAAGTGTCCCAAAGGCTTTTATCCTCCAACCCGCCATTAGCCATTCCTTTCAATAATATCTCACTCCAGCATCTAGTGAATCAAGATATGCAACTTGCATACACCTTGATTGTAACCGAAAAATGTGATGTTTATAGTTTTGATGTTGTGACATTAGAAACAGTCATGGGGAAACATCCTAGAGATCGGATATCGTCTTTGTCAAAGACATGTACTAAAAGCATTTTGCTAAAAGATGCGTTAGACCAACGTCTTTTGACCACAGTAGCATTAGCATGCCAGAATCCATCTCCAAAATCTCGACCATCAATGCAGCAAGTGTCTCAAAGGCTTTTATCCTCCAACCAGTCATTAGCCATTCCTTTCAACGAGCTACAAACCCCACGCGTTGCACAGGTTGATTTCACAATAATGCAACATTCTATGGAATCTCGTGAGTGTCCATTATACATACATCAACACTCCTAA	1881	0.3753	MNVYSHLSKLVYPVIITRFYFRGDMAVKVVFFLCLSLTCFHINGAAVAMIAEEKRALLQTKCHNKFNGTLPSDKCILPSRCNIDLSYNNIFGSIPRELGRLESINLSYNNLSGYVPSEVYITFPHDVLYGNKELLGSKKMHDSSYLLKIIIPLTSFLVIIFVTSFILFQSFKKNKKTTIGTREPKNGDLFSIWNYDGKIAYEDIIEATEDFDIKYCIGTGAYGSVYRARLPTGRIVALKKLHRREYENQSFAKSFQNEVKMLSEIRHRNIIKLHGFCLHNQCMFLIYEYMERGSLFYVLNNDEEAKELDWSKRVNGIKGITNALFYMHHHCAPPIIHRDITSSNVLLNSTMEALVSDFGTARIIDPDTSNQTLVVGTYGYVAPELAYTLVVTEKCDVYSFGVVTLETIMGRHPGDLISSLSKTCNESILLKDVLDARLPMPKRRDAGDVTLLVTIALACLNPSPKSRPSMQQVSQRLLSSNPPLAIPFNNISLQHLVNQDMQLAYTLIVTEKCDVYSFDVVTLETVMGKHPRDRISSLSKTCTKSILLKDALDQRLLTTVALACQNPSPKSRPSMQQVSQRLLSSNQSLAIPFNELQTPRVAQVDFTIMQHSMESRECPLYIHQHS	626

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele13g0547	626	SUPERFAMILY	Protein kinase-like (PK-like)	506	596	IPR011009	-
	Lele13g0547	626	ProSiteProfiles	Protein kinase domain profile.	211	484	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele13g0547	626	SUPERFAMILY	Protein kinase-like (PK-like)	193	477	IPR011009	-
	Lele13g0547	626	FunFam	MDIS1-interacting receptor like kinase 2	290	483	-	-
	Lele13g0547	626	Gene3D	Ribonuclease Inhibitor	54	143	IPR032675	-
	Lele13g0547	626	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	335	347	IPR008266	GO:0004672\|GO:0006468
	Lele13g0547	626	SUPERFAMILY	L domain-like	63	118	-	-
	Lele13g0547	626	FunFam	Leucine-rich repeat receptor protein kinase MSP1	173	289	-	-
	Lele13g0547	626	Gene3D	Phosphorylase Kinase; domain 1	172	289	-	-
	Lele13g0547	626	Gene3D	Transferase(Phosphotransferase) domain 1	499	597	-	-
	Lele13g0547	626	Gene3D	Transferase(Phosphotransferase) domain 1	290	483	-	-
	Lele13g0547	626	PANTHER	LEUCINE RICH REPEAT KINASE 2	502	588	-	-
	Lele13g0547	626	Pfam	Protein kinase domain	215	475	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele13g0547	626	ProSitePatterns	Protein kinases ATP-binding region signature.	217	239	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele13g0547	Lele-ChrLele13	17708167	17717014	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele13g0547	63	383	Receptor kinase-like Gene Family	AT4G08850	43.605	1.21e-85	286

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Lele13g0547		Pkinase	2.4e-46	CL0016