Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0545 ATGGGTACCATTTCAATTCAGATAGGAGCTCTTCATAATCTTATTTATTTGAACTTGTCTCATAACCACCTTACTGGTACAATTTCAACTGAGATAGGAGCTCTTCAGAATCTCACTTATTTAGACTTGTCTCATAACAACCTCACTGGTACTATTCCAATTCAGATAGGAACTCTTCAAAATCTTGGCCAGCTATATTTGTCTCATAATAGCCTTATTGGTGATATCCCTCCTTCCCTTTTCAATTTGACAAATTTACAATACTTTGATGTTTCTCAAAATCATTTAAGTGGAAGCATGCCAAAAGAGATTCGACCTCTTTCTTATTATTTTTATTATATAAACATCTCCCAAAATAATCTGAGTGGAAACATGCCCTACGTTTGGCACAATGATTTTCATGGTGACTTTAGTCACAACAAATTCAATGGAACATTGCCATATCAAATATGTAGTTACCCTTCACAATGTAACATTGATTTGAGCTACAATAACATCTCTGGAAGTATAGATAGAGGACTTGAGCTTGCATACACTCTAATTGTGACTGAAAAGTGTGATGTTTATAGTTTTGGAGTGGTGACACTAGAAACAATGATGGGAAGACATCCTGGAGATCTGATATCGTCTCTGTCAAAGACATGTAATGAAAGTATGTTGTTAAAAGATATCTTAGACGCACGTCTTTCTTTGCCAGCACAGAGAGATGCAGGAGATGTGACATTTTTGGTGACAATAGCATTAGCATGCTTGAATCCGTCTCCTAAATCTCGACCATCAATGCAACAAGTGTCCCAAAGGCTTGTATCCTCCAACCTGCCATTAGCCTTTCCTTTCAACAATATCTCACTCCAGCATCTAGTGAATCCAGATTTGCAAATAAGCTAA 888 0.3671 MGTISIQIGALHNLIYLNLSHNHLTGTISTEIGALQNLTYLDLSHNNLTGTIPIQIGTLQNLGQLYLSHNSLIGDIPPSLFNLTNLQYFDVSQNHLSGSMPKEIRPLSYYFYYINISQNNLSGNMPYVWHNDFHGDFSHNKFNGTLPYQICSYPSQCNIDLSYNNISGSIDRGLELAYTLIVTEKCDVYSFGVVTLETMMGRHPGDLISSLSKTCNESMLLKDILDARLSLPAQRDAGDVTFLVTIALACLNPSPKSRPSMQQVSQRLVSSNLPLAFPFNNISLQHLVNPDLQIS 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0545 295 SUPERFAMILY Protein kinase-like (PK-like) 175 267 IPR011009 -
Lele13g0545 295 Pfam Leucine Rich Repeat 13 32 IPR001611 GO:0005515
Lele13g0545 295 PRINTS Leucine-rich repeat signature 14 27 - -
Lele13g0545 295 PRINTS Leucine-rich repeat signature 35 48 - -
Lele13g0545 295 SUPERFAMILY L domain-like 4 175 - -
Lele13g0545 295 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 172 - -
Lele13g0545 295 Gene3D Ribonuclease Inhibitor 1 177 IPR032675 -
Lele13g0545 295 Gene3D Transferase(Phosphotransferase) domain 1 178 276 - -
Lele13g0545 295 FunFam Leucine-rich repeat receptor protein kinase EMS1 29 128 - -
Lele13g0545 295 Pfam Leucine rich repeat 37 96 IPR001611 GO:0005515
Lele13g0545 295 Pfam Protein tyrosine and serine/threonine kinase 175 268 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0545 Lele-ChrLele13 17681784 17685770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0545 172 268 Receptor kinase-like Gene Family AT3G51740 29.126 3.37e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele13g0545 PK_Tyr_Ser-Thr 2.9e-06 CL0016