Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0543 ATGTCTTATACTGCCCGGATACAAAACCCCCAACTTGAATGGCCTATCCGGAAGCGAATTGCACTGGGCTCTACAAGGGGGCTTGCTTATTTGCATGATCATTGGGATCCAAAGATCATTCACCGTGATGTTAAAGCTGCTAATATAATATTGGATGAGGAATATGAAGCAGTTGGGGACTTTGGCTTGGTAAAACTCATGGATTATAAAGACACTCATGTTACCACTGCCGTGCGTGGTACAATCGAGCACATTACTCCAAAATACCTCTCCACTGGAAAGTCTTCAGAGAAGACCGATGTTTTCGGTTATGGTGTTATGCTTCTTGAACTAATAACTGGATACAGGGCTTTCGATCTTGCTCGACTCGCCAATGATAATGATGTCATGTTACTTGATTGGGTGAAAGGACTCTTGAAAGAGAAGAGATTGGAAACACTAGTGGATGCTGATTTGCAGGGTGAATATAATGAAGAGGAGGTAGAGCAACTAATCCAAGTGGCCTTGTCTGCACACAAAGCTCGGCTATGGAAAGACCAAAGATATCTGAGGTGGTAA 558 0.4319 MSYTARIQNPQLEWPIRKRIALGSTRGLAYLHDHWDPKIIHRDVKAANIILDEEYEAVGDFGLVKLMDYKDTHVTTAVRGTIEHITPKYLSTGKSSEKTDVFGYGVMLLELITGYRAFDLARLANDNDVMLLDWVKGLLKEKRLETLVDADLQGEYNEEEVEQLIQVALSAHKARLWKDQRYLRW 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0543 185 Gene3D Transferase(Phosphotransferase) domain 1 2 179 - -
Lele13g0543 185 SUPERFAMILY Protein kinase-like (PK-like) 7 170 IPR011009 -
Lele13g0543 185 FunFam Somatic embryogenesis receptor-like kinase 1 2 180 - -
Lele13g0543 185 Pfam Protein kinase domain 17 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0543 185 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0543 185 ProSitePatterns Serine/Threonine protein kinases active-site signature. 39 51 IPR008271 GO:0004672|GO:0006468
Lele13g0543 185 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0543 Lele-ChrLele13 17675000 17675666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0543 10 174 Receptor kinase-like Gene Family AT4G33430 84.337 2.99e-94 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele13g0543 Pkinase 2.3e-21 CL0016