Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0541 ATGGCAGATGAGGAGGAGCTTGAAGCTCACTTTGGTCAGCTTAAAAAGTTTCCCCTGCGTGAACTTCAAGTTGCAACAGACAACTTTAATAACAAAAACATTCTGGGTAGAGGTGGATTTCGTAAGGTTTATAAAGGACGGTTGAATGATGGATCTTTAGTTGCAGTGAAAAGACTTAAAAAGGAAGGTGCTCGGGGTGGAGAGCTGCAATTTCTAACAGAAGTAAAAATGATCCGCTTGGTTGTCCATCGTAATTTGCTCCGACTTCATGGTTTTTGCATGACTCCAACTGAACGCTTGCTGGTGTATCCTTTCATGGCTAATGGTAGTGTGGCATCATGTTTACGAGAGAAGATTGATGTTTATGGTTATGGTGTAATGCTTCTTGAACTAATCAGTGGACATCGGGCTTTTGATCTAGCACGACGTGCTGTTGACGATAATGTCTTGTTACTTGATTGGAATCCGGTCACATATCCTATTCCCCTTTCTATGATTTGGCAACTTGACATTACTGGATTGAAAGGGCTTTTGAAAGACAAGAGATTGGAAACACTAGTTGATGATGATTTGTGGGGTAAATATAATGAAGAGGAGGCGGAGCAACTAATCAAATTGGCCTTGCTCTGCACAAAATGCTTGGCCATGGAAAGACCAAAGATGTTTGAGGTGGTACGGATGCTTGAAGGTGATGGTAGACAAGATACATCGACGAGATAA 720 0.4167 MADEEELEAHFGQLKKFPLRELQVATDNFNNKNILGRGGFRKVYKGRLNDGSLVAVKRLKKEGARGGELQFLTEVKMIRLVVHRNLLRLHGFCMTPTERLLVYPFMANGSVASCLREKIDVYGYGVMLLELISGHRAFDLARRAVDDNVLLLDWNPVTYPIPLSMIWQLDITGLKGLLKDKRLETLVDDDLWGKYNEEEAEQLIKLALLCTKCLAMERPKMFEVVRMLEGDGRQDTSTR 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0541 239 Pfam Protein kinase domain 30 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0541 239 SUPERFAMILY Protein kinase-like (PK-like) 19 230 IPR011009 -
Lele13g0541 239 Gene3D Phosphorylase Kinase; domain 1 1 105 - -
Lele13g0541 239 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 116 229 - -
Lele13g0541 239 ProSiteProfiles Protein kinase domain profile. 29 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0541 239 FunFam Somatic embryogenesis receptor kinase 1 1 105 - -
Lele13g0541 239 Gene3D Transferase(Phosphotransferase) domain 1 115 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0541 Lele-ChrLele13 17648726 17654443 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0541 117 232 Receptor kinase-like Gene Family AT4G33430 62.069 7.52e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele13g0541 Pkinase 4.2e-13 CL0016