Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0540 ATGGTCATTATGGAATCCAGTGATCTTTCAAATAACCAGCTAGAAGGAGACATACCTGTCAATGGCTCATTTCAATTGTTTACTCCACTCAGTTTCGGAGACAATCCTCATTTGAGACCAATAAACCTAACACCTGGACCAGTGTTGCCAACACCTCCAGGCAATAGTGCAACTGGAGTTATTGCTGCAGGAGTTGGTGCTGCTGCTGTGGTGTTTACAGCCTCTGCAATTGCACTTGCTTATTATTACTGGAAAAGGATTCCACTTGCTTACTGCTGGAAAAGGAGACCACCATATTATGCCTTTGATGTTTATGATGAGGAGGAGCTTGAAGATCATTTTGGTCAGCTTAAAAAGTTTCCCCTGCGTGAACTTCAAGTTGCAACAGACAACTTTAATAACAAAAACATTCTGGGTAGAGGTGGATTTGGTAAGGTTTATAAAGGACGGTTGAATGATGGATCTTTAGTTGCAGTGAAAAGACTTAAAAAGGAAGGTGCTCAGGGTGGAGAGCTGCAATTTCTAACAGAAGTAAAAATGATCAGCTTGGCTGTCCATCGTAATTTGCTCCGGCTTCATGGTTTTTGCATGACTCCAACTGAACGCTTGCTTGTGTATCCTTTCATGGCTAATGGTAGTGTGGCATCATGTTTACGAGCTGTGCGTGGTACAATTGGGTACATTGTACCAGAATACCTCTTAACTGGAAGGTCTTCAGAGAAGACTGATGTTTATAGTTATGGTGTAATGCTTCTTGAACTAATGACTGGACAGAGGGCTTTTGATCTAGCACGACGTGCCATTGACGATAATGTCTTGTTACTTGATTGGGAGGAGGAGCAACTAATCAAATTGGCCTTGCTCTGCACACAATGCTCGGCCACGGAAAGACCAAAGATGTCTGAGGTGGTCCAGATGATTGAAGATGATGGTTTGGTTGAAAAATTGGATCAATGTCAGAAAGACAAGATGCATCAACAAGATAATCAAACCCTTCTCCCTAATGATAATTGGCCGACTGTCGACTTGGCATCACATATCCCACCAGATGAACTCTCAGGTGCACAGGAAGTTTCTGAGATGGGTTATCTGGGAAGAGATCAAGGGGAAGGGGAAGGGAGAGAGAGGGGCGTGAAGGTGGAGAAAAAGAAGAGATGGGAGGAGACGAGGGGTGGCGGGACAGCATCTGGAGGAGGTAATTATGAGCATAACTGTGCAGTAAGAAATTATCTGGACACAGCATATGACCGTATCCTCCTTTCAAGGACGTGTGTTCCTCATTATGTTGCTACAGCTTTGACTTCCATTAGAGAGATGGTTGAAGGGGTTGACATCATAGAGATATGGGATCTCCCTCCAGTTGTTGTACTAAGAGTTTTTCCTCAGATGCAGCAATATTTGAATACGTACATTCATGTCAAAGGCTACGTTATTCTTCAAAGATGTCCAAAAGCAATGAACATAAGCATAACATGCTGGAGTGAGATATTATTGAAAGGAATGGCTAATGGCAGGTTGGAGGATAAAAGCCTTTGGGACACTTGTTGCATTGATGGTCGAGATTTGGGAGACGGATTCAAGCATGCTAATGCTATTGTCACCAAAAGTGTCACATCTCCTGCATCTCTCCATTCTGGCAATAGAAGACGTGTGTCTAAGATATCTTTTAGCAAAATACTTTCATTACAGGTCTTTGACAGAGACGATATCAAATCTCCAGGATGTCTTCCCATCATTGTTTCCAGTGTCACCACTCCAAAACTATAA 1767 0.4278 MVIMESSDLSNNQLEGDIPVNGSFQLFTPLSFGDNPHLRPINLTPGPVLPTPPGNSATGVIAAGVGAAAVVFTASAIALAYYYWKRIPLAYCWKRRPPYYAFDVYDEEELEDHFGQLKKFPLRELQVATDNFNNKNILGRGGFGKVYKGRLNDGSLVAVKRLKKEGAQGGELQFLTEVKMISLAVHRNLLRLHGFCMTPTERLLVYPFMANGSVASCLRAVRGTIGYIVPEYLLTGRSSEKTDVYSYGVMLLELMTGQRAFDLARRAIDDNVLLLDWEEEQLIKLALLCTQCSATERPKMSEVVQMIEDDGLVEKLDQCQKDKMHQQDNQTLLPNDNWPTVDLASHIPPDELSGAQEVSEMGYLGRDQGEGEGRERGVKVEKKKRWEETRGGGTASGGGNYEHNCAVRNYLDTAYDRILLSRTCVPHYVATALTSIREMVEGVDIIEIWDLPPVVVLRVFPQMQQYLNTYIHVKGYVILQRCPKAMNISITCWSEILLKGMANGRLEDKSLWDTCCIDGRDLGDGFKHANAIVTKSVTSPASLHSGNRRRVSKISFSKILSLQVFDRDDIKSPGCLPIIVSSVTTPKL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0540 588 MobiDBLite consensus disorder prediction 367 390 - -
Lele13g0540 588 SUPERFAMILY Protein kinase-like (PK-like) 118 312 IPR011009 -
Lele13g0540 588 FunFam Somatic embryogenesis receptor kinase 1 101 208 - -
Lele13g0540 588 Gene3D Transferase(Phosphotransferase) domain 1 205 327 - -
Lele13g0540 588 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 314 - -
Lele13g0540 588 MobiDBLite consensus disorder prediction 365 398 - -
Lele13g0540 588 ProSiteProfiles Protein kinase domain profile. 132 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0540 588 Pfam Protein tyrosine and serine/threonine kinase 135 220 IPR001245 GO:0004672|GO:0006468
Lele13g0540 588 Pfam Protein tyrosine and serine/threonine kinase 225 306 IPR001245 GO:0004672|GO:0006468
Lele13g0540 588 ProSitePatterns Protein kinases ATP-binding region signature. 138 160 IPR017441 GO:0005524
Lele13g0540 588 Gene3D Phosphorylase Kinase; domain 1 101 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0540 Lele-ChrLele13 17614858 17624922 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0540 220 328 Receptor kinase-like Gene Family AT4G33430 58.955 4.37e-39 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele13g0540 PK_Tyr_Ser-Thr 3.8e-06 CL0016