Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0536 ATGAGCCTGTGTGATGCTACTGGAGCTATCGCCGGAGGAGTTGCTGCTGCTGCTGCTGCCGCCCTGATGCTTGCAGCCCCTGCAATTGCACTCGCTTATTGCCGGAAGAGGAGACTACAAGATTATTTCTTTGATGTCCCTGCTGAGGAGGACCTTGAAGTTCATCTTGGTCAGCTTAAAAAGCTCCCCCTTCGTGAGCTGCAAGTTGCAACCGACAACTTTAGTAACAAAAACATTCTGGGTAGAGGTGGATTTGGTAAGGTTTACAAAGGACGGTTAACTGATGGGTCTCTAGTTGCAGTGAAAAGACTTGAAGAGGAACGCACTCAAGGTGGAGAGCTCAAATTTCGAACAGAAGTAGAAATTATAAGCATGGTTGTCCATCGTAATTTGCTGCGGCTGCGTCGCTTTTGCATGACACGAACTGAACGGTTGCTTGTGTATCCTTTACATGGCTAA 459 0.4749 MSLCDATGAIAGGVAAAAAAALMLAAPAIALAYCRKRRLQDYFFDVPAEEDLEVHLGQLKKLPLRELQVATDNFSNKNILGRGGFGKVYKGRLTDGSLVAVKRLEEERTQGGELKFRTEVEIISMVVHRNLLRLRRFCMTRTERLLVYPLHG 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0536 152 Gene3D Phosphorylase Kinase; domain 1 43 149 - -
Lele13g0536 152 FunFam Somatic embryogenesis receptor kinase 1 43 150 - -
Lele13g0536 152 ProSiteProfiles Protein kinase domain profile. 74 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0536 152 Pfam Protein kinase domain 75 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0536 152 ProSitePatterns Protein kinases ATP-binding region signature. 80 102 IPR017441 GO:0005524
Lele13g0536 152 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 56 150 - -
Lele13g0536 152 SUPERFAMILY Protein kinase-like (PK-like) 55 150 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0536 Lele-ChrLele13 17571560 17572240 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0536 22 149 Receptor kinase-like Gene Family AT4G33430 81.250 6.15e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele13g0536 Pkinase 2.9e-11 CL0016