Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0532 ATGGATGGTCGAGATTTGGGAGATGGATTCAAGCATGCTAATGCTATTGTCACCAAAAGTGTCACAGCATCTCTCAATTCTGGAAGTGGAAGACGTGCCTCTAACACATCTTTAAGCAAAATGCATTTAGTACCTGCCTTTGACAAATACGATATCAAATCTCCCAGATGCCTTCCCATGCTTGTGTATGCAAGCTCTGCACTGGTGGATTTCAGTCGCATTTCAATCATTTACTTAACTCAGGTTGGTGCAAGTGATTTGAATGCTGAAAGAAGAGTGTGGGTTAAACAACCCACACAATTACTTCCTTTGCTCCTTTCCCTGAAGAAAAGTGTGCAAGGTGGGATAATTATTGGGTGGGAAGGCAATAGTGCTACTGGAGCTGTCGCCGGAGGAGTTGCTGCTGCTGCTGCTCTGATGTTTGCAACCCCTGCAATTGCACTCGCTTATTGCCGGAAGAGGAGACGACAAGATTATTTCTTTGATGTCCCTGCTGATGAGGACCCTGAAGTTCATCTTGGTCAGCTTAAAAAGCTCCCCCTTCGTGAGCTGCAAGTTGCAACCGACAACTTTAGTAACAAAAACATTCTGGGTAGGGGTGGATTTGGTAAGGTTTACAAAGGACGGTTAACTGATGGGTCTCTAGTTGCAGTGAAAAGACTTAAAGAGGAACGCACTCAAGGTGGAGAGCTGAAATTTCAAACAGAAGTAGAAATGATCAGCTTGGCTGTCCATCGTAATTTGCTGCGGCTGCGTGGCTTTTGCATGTCACCAACTAAACGGTTGCTTGTGTATCCTTACATGGCTAATGGTAGTGTGGCATCGTGTTTACAAGAGGAGGTAGAGCAACTAATCCAAGTGGCCTTGCTCTACACACAAAGCTCGGCTATGGAAAGACCAAAGATGTCTGAGGTGGTAAGTGATGATTTGGCTAAAAAATGGGATCAATGGCAGAAAGACGAGATGTATCGGTGA 975 0.4492 MDGRDLGDGFKHANAIVTKSVTASLNSGSGRRASNTSLSKMHLVPAFDKYDIKSPRCLPMLVYASSALVDFSRISIIYLTQVGASDLNAERRVWVKQPTQLLPLLLSLKKSVQGGIIIGWEGNSATGAVAGGVAAAAALMFATPAIALAYCRKRRRQDYFFDVPADEDPEVHLGQLKKLPLRELQVATDNFSNKNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELKFQTEVEMISLAVHRNLLRLRGFCMSPTKRLLVYPYMANGSVASCLQEEVEQLIQVALLYTQSSAMERPKMSEVVSDDLAKKWDQWQKDEMYR 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0532 324 FunFam Somatic embryogenesis receptor kinase 1 160 267 - -
Lele13g0532 324 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 278 315 - -
Lele13g0532 324 Pfam Protein tyrosine and serine/threonine kinase 194 291 IPR001245 GO:0004672|GO:0006468
Lele13g0532 324 ProSitePatterns Protein kinases ATP-binding region signature. 197 219 IPR017441 GO:0005524
Lele13g0532 324 Gene3D Phosphorylase Kinase; domain 1 160 267 - -
Lele13g0532 324 SUPERFAMILY Protein kinase-like (PK-like) 170 284 IPR011009 -
Lele13g0532 324 ProSiteProfiles Protein kinase domain profile. 191 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0532 Lele-ChrLele13 17526013 17528683 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0532 279 324 Receptor kinase-like Gene Family AT4G33430 72.000 4.54e-15 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele13g0532 PK_Tyr_Ser-Thr 4.7e-15 CL0016