Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0527 ATGGCAGGTTGGAGGATACATACCTCTGATACACTTGCTGCATGGATGGTCGAGATTTTGGGAGATGGATTCAAGCATGCTAATGCTATTGTCACCAAAAGTGTCACAGCATCTCTCAATTCTGGAACTGGAAGACGTGCCTCTAACACATCTTTAAGCAAAATGCATTTAGTACCTGCCTTTGACAAATACGATATCAAATCTCCCAGATGCCTTCCCATGCTTGTGTATGCAAGCTCTGCACTGGTGGATTTCAGTCGCATTTCAATCATTTACTCAACTCAGGTTGGTGCAAGTGATTTGAATGCTGAAAGAAGAGTGTGGGCTAAACAACCCACACAATTACTTCCTTTGCTCCTTTCCCTGAAGAAAAGTGTGCAAGGTGGGATAATTATTGGGTGGGAAGGCAATAGTGCTACTGGAGCTATCGCGGGAGGAGTTGCTGCTGCTGCTGCTCTTATGTTTGCAGCCCCTGCAATAGCACTTGCTTATTGCCGGAATAGGAGACCACAAGATTATTTCTTTGATGTCCCTGCTGAGGAGGACCCTGAAGTTCACCTTGGTCAGCTTAAAAAGTTTCCCCTTCGTGAGCTGCAAGTTGCAACCGACAACTTTAGTAACAAAAACATTCTGGGTAGGGGTGGATTTGGTAAGGTTTACAAAGGACGGTTAACTGATGGGTCTCTAGTTGCAGTGAAAAGACTTACAGAGGAACGCACTCAAGGTGGAGAGCTGAAATTTCAAACAGAAGTAGAAATGATCAGCTTGGCTGTCCATCGTAATTTGCTGCGGCTGCGTGGCTTTTGCATGACACCAACTAAACGGTTGCTTGTGTATCCTTACATGGCTAATGGTAGTGTGGCATCGTGTTTACAAGAGAAGACTGATGTTTTCGGTTATGGTGTGATGCTGCTTGAACAAATAACTGGACAGAGGGCTTTCGATCTTGCTCGGCTTGCCAATGATGATGATGTCATGTTACTTGATTGGGAGGTAGAGCAACTAATCCAAGTGGCCTTGCTCTACACACAAAGCTCGGCTATGGAAAGACCAAAGATGTCTGAGGTGATAAAGATGCTTGAAGGTGATGATTTGGCTAAAAAATAG 1107 0.4463 MAGWRIHTSDTLAAWMVEILGDGFKHANAIVTKSVTASLNSGTGRRASNTSLSKMHLVPAFDKYDIKSPRCLPMLVYASSALVDFSRISIIYSTQVGASDLNAERRVWAKQPTQLLPLLLSLKKSVQGGIIIGWEGNSATGAIAGGVAAAAALMFAAPAIALAYCRNRRPQDYFFDVPAEEDPEVHLGQLKKFPLRELQVATDNFSNKNILGRGGFGKVYKGRLTDGSLVAVKRLTEERTQGGELKFQTEVEMISLAVHRNLLRLRGFCMTPTKRLLVYPYMANGSVASCLQEKTDVFGYGVMLLEQITGQRAFDLARLANDDDVMLLDWEVEQLIQVALLYTQSSAMERPKMSEVIKMLEGDDLAKK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0527 368 Gene3D Phosphorylase Kinase; domain 1 174 277 - -
Lele13g0527 368 ProSitePatterns Protein kinases ATP-binding region signature. 211 233 IPR017441 GO:0005524
Lele13g0527 368 FunFam Somatic embryogenesis receptor kinase 1 174 281 - -
Lele13g0527 368 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 292 360 - -
Lele13g0527 368 SUPERFAMILY Protein kinase-like (PK-like) 190 361 IPR011009 -
Lele13g0527 368 ProSiteProfiles Protein kinase domain profile. 205 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0527 368 Gene3D Transferase(Phosphotransferase) domain 1 278 366 - -
Lele13g0527 368 Pfam Protein tyrosine and serine/threonine kinase 208 294 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0527 Lele-ChrLele13 17475792 17478450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0527 281 368 Receptor kinase-like Gene Family AT4G33430 61.947 1.99e-32 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele13g0527 PK_Tyr_Ser-Thr 2.1e-13 CL0016