Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0520 ATGCCTCTTCCTGTTTTTGTTAATGTTCCAAAGACCAAAAAGACTTACTGCAAGAATAAAGAATGCAAGAAGCACACCTTACATAAGGTAACACAATACAAGAAAGGGAAAGATAGCCTTGCAGCTCAGGGTAAGCGCCGTTATGATCGCAAACAGTCCGGATATGGTGGCCAGACAAAGCCTGTCTTCCACAAGAAGGCAAAAACCACAAAGAAAATTGTATTGAGGCTGCAGTGTCAGGCATGCAAACACGTATCCCAACACGCAATCAAGAGATGTAAGCATTTTGAGATCGGCGGTGATAAGAAGGGGAAGGGAACCTCTCTGTTTTAG 333 0.4354 MPLPVFVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQACKHVSQHAIKRCKHFEIGGDKKGKGTSLF 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0520 110 MobiDBLite consensus disorder prediction 33 61 - -
Lele13g0520 110 SUPERFAMILY Zn-binding ribosomal proteins 7 99 IPR011332 GO:0006412
Lele13g0520 110 MobiDBLite consensus disorder prediction 33 53 - -
Lele13g0520 110 Pfam Ribosomal protein L44 24 99 IPR000552 GO:0003735|GO:0005840|GO:0006412
Lele13g0520 110 Gene3D - 6 110 - -
Lele13g0520 110 FunFam 60S ribosomal protein L44 6 110 - -
Lele13g0520 110 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 7 110 IPR000552 GO:0003735|GO:0005840|GO:0006412
Lele13g0520 110 ProSitePatterns Ribosomal protein L44e signature. 68 79 IPR000552 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0520 Lele-ChrLele13 17374909 17375981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0520 6 110 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 93.333 8.90e-68 197