Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0519 ATGTCAGACTTTCGGGACGCCTCAGCAGCCAACTCATGGGACTTCTCAGCGTTCGTGAGGACGTATGCATTGTATATGGATGAGAAGTCGGAGTATAAAATGCTGAATAAGAGAGGAAGAAGAAGCTCATTCAGGTATGAGGAAGAAGATGAGGATGCAAGGGATAATACGGATAGATATACGCTTACATACAGGGATAGAGACAAAGACAGAGGAGGAGACAGAGGCGGAGAAGGAGATAGAGATAGAGATAGAGACAAGAATAGATCAGAAAACATTGGGAGGTCTACACCATTGCATGAGATGAGGATAGAGGAATTGTTCTCTAAGATGCAACATTTACAATTATTATTTGAGAGGTTCTTGGCATGTCGTCCCACAGGAGAAGCAAAGAACCATCGAATTGTGCCGGTGGCTCTCTACCCTATATTGAAGGAGAGTTTCCAAATATATTATGAAATGATAGAAATTTTGGGTATCTTAGTTGACCGTTTTGAGGACATGGAGAATCAAGATTGCATCAAGACTTACGAAATTTTCTGTCGAGTCGGAAAGCAGTACAGTGAGTTAGACCTCTTCTACACATGGAATAAGAGTATGGAACCAGAAGAGCTAGAACCACCACAAGAAGATATGAACGCACTCAAGGCACTACCACCACCAGAGACAAAAAAGGAACCAATAGAAGAGCCTAAAATAGAGGAACCAAAAGTTGTACAAACAGAAGGTGACTTGTTGCACTTAGGGGACGATGACATGGTAACCAGAGAATATCATGAAAATAAACTAGCCTTGGCACTGTTCGATCGCGTAGGACCGACGACTTCTGAGGCATCTGGTGCCACACTAGCTCTTCCATGGCATGCTATTGAAGATGGTTCGGATTGGAAAAAAAGCATTGGTGGAATCAGCAAGCAAATTGTAAAACCAGAAGCCAACATTAGGAGCTTCAATGGCAGTGGCACCTCCGCCTTACGTTCAAATGTCGAATATGGAGAAAAAGCTGAGATTGTTGACAGAGGAACAACTATTGTGGCAGCAATATCAAAGAAATGGCATGCAGGGACATGTTGGAATGACAATGCAACCTAG 1092 0.4286 MSDFRDASAANSWDFSAFVRTYALYMDEKSEYKMLNKRGRRSSFRYEEEDEDARDNTDRYTLTYRDRDKDRGGDRGGEGDRDRDRDKNRSENIGRSTPLHEMRIEELFSKMQHLQLLFERFLACRPTGEAKNHRIVPVALYPILKESFQIYYEMIEILGILVDRFEDMENQDCIKTYEIFCRVGKQYSELDLFYTWNKSMEPEELEPPQEDMNALKALPPPETKKEPIEEPKIEEPKVVQTEGDLLHLGDDDMVTREYHENKLALALFDRVGPTTSEASGATLALPWHAIEDGSDWKKSIGGISKQIVKPEANIRSFNGSGTSALRSNVEYGEKAEIVDRGTTIVAAISKKWHAGTCWNDNAT 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0519 363 Pfam ANTH domain 1 201 IPR011417 GO:0005543
Lele13g0519 363 ProSiteProfiles ENTH domain profile. 1 40 IPR013809 -
Lele13g0519 363 Gene3D - 1 36 IPR008942 -
Lele13g0519 363 Gene3D ANTH domain 92 240 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lele13g0519 363 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 287 IPR045192 GO:0048268|GO:0072583
Lele13g0519 363 SUPERFAMILY GAT-like domain 98 209 - -
Lele13g0519 363 MobiDBLite consensus disorder prediction 42 96 - -
Lele13g0519 363 FunFam putative clathrin assembly protein At2g25430 94 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0519 Lele-ChrLele13 17371825 17373478 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0451 14 16154547 16160460 Lele13g0519 13 17371825 17373478 CCT
Lele15g1936 15 12091453 12098227 Lele13g0519 13 17371825 17373478 CCT
Lele16g1970 16 12029027 12032556 Lele13g0519 13 17371825 17373478 CCT
Lele13g0519 13 17371825 17373478 Lele13g0519 13 17371825 17373478 ECH
Lele13g0519 13 17371825 17373478 Lele15g1955 15 12275538 12285321 hybridization
Lele13g0519 13 17371825 17373478 Lele16g1977 16 12094760 12096779 hybridization