Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0516 ATGGCCATAGGAGAGTTCGTGTCCGTCTACACACAATACGACATAGAAAAGGAGCAACTCAAAAGACAACAAGAAGAAGAAGGTGAAAGTACTGATTATGAAGAGAAGAAGAAGAAGCTGCCAAGTCCATATCAAGCAGCTCTGGCATCAGCATTAGCGTTCTCTGTAGGAGCAGCGCTGCCATTGTTGGGAGCTGTGTTCATAAGAGACTATAAAATTAGGTTAAGTGTGGTTGCCTCAGTGGTGAGCTTGTCCTTGCTTGTGTTCGGAGGCGTCGGAGCAGTGCTTGGTAACACTTCTGTGAAGAAGTCGTGCATTAGGGTTCTTATTGGAGGGTGGACCGCCATGGCCATAACCTTTGGCCTCACCAAGTTGATTGGAGCCACGGGTCTCTGA 396 0.4773 MAIGEFVSVYTQYDIEKEQLKRQQEEEGESTDYEEKKKKLPSPYQAALASALAFSVGAALPLLGAVFIRDYKIRLSVVASVVSLSLLVFGGVGAVLGNTSVKKSCIRVLIGGWTAMAITFGLTKLIGATGL 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0516 131 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 126 IPR008217 GO:0005384|GO:0030026
Lele13g0516 131 Pfam VIT family 36 123 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0516 Lele-ChrLele13 17352162 17352557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0516 1 131 Nodulin-like Gene Family AT3G43660 61.069 2.61e-51 159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0516 13 17352162 17352557 Lele15g1958 15 12303462 12304130 hybridization
Lele13g0516 13 17352162 17352557 Lele16g1981 16 12115285 12116028 hybridization