Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0514 ATGGTCCACGTCAGCCGTTTCTGCCAGTTGAGTTACCGGGAAGTTGATATTGACGGACACACTTTGTCGGAAGCTGGTTTCAGTCTCGGAAATCCCGCTTGTAGCTTCTTTCTTTCGCCGATTGAACCTTGTTGTGAGTTTCCTGAATTTTCGATTGAGATTATGTCCGGCATTATTCGAATGCTTAGATCCGTAAATGATGCTTCACTTCTTCGTTTAATGGGGATTTGTTTCTCGAGAAAGTCAGAATGTGATATGAATCGCTTACTCTTTTCCTCCCATAAAGGTCATTATTGTGCAAGGACTAGCAAAATGGACAGAAGTGTTGGAATTGTGATTGATGAGTCTAGCATCATGAAAGCAATTGAACCATTGCCAGAGGATTTTGATCCAACGGCTGTGATTAAGGATCCTGTACCACCCATAGTTGAAAATAATGGAAATGGTCATGCGGTGAACAAGATGAGTGAGGATAAAAGTAAAAGAGAGATAGTACTTGGCAGGAATGTTCATACCACATGCTTGGAAGTCACGGAACCAGATGCTGATGATGAGGTGATAGGGGACAGGGAAGCTTACATGGCAAGTGTTTTGGCTAGATACAGGAAATCTCTGATGGAAAGGACGAAGCATCATTTAGGTTATCCCTATAATTTGGATTTCGACTATGGTGCCCTTGCCCAGCTGCAGCACTTTTCTATAAACAACTTGGGAGATCCATTTATTGAAAGTAACTACGGCGTCCACTCACGGCAGTTTGAAGTAGGTGTTTTGGATTGGTTTGCCCGATTATGGGAGATTGAGAAAAATGAGTACTGGGGCTATATAACAAACTGTGGCACAGAAGGGAATCTACATGGCATTCTAGTTGGGAGAGAGGTTTTCCCAGATGGGATTCTGTATACCTCACGGGAAACACATTATTCTGTTTTTAAAGCTGCTCGTATGTACAGAATGGAATGTGTGAAAGTTGACACACACTGTACTGGGGAGATTGATTGTGATGATTTCAAGGCCAAGATTATTCGTAACAAAGACAAGCCAGCAATTGTAAATGTGAATATAGGAACAACTGTCAAAGGAGCTATGGATGATCTTGATCTAGTGATAAAGACACTTGAAGAAGCAGGATTTTCACATGACCGGTTCTACATCCACTGTGACGGAGCTTTATTTGGTCTCATGATGCCTTTTGTCAAACGCGCTCCAAAAGTCTCTTTTAAGAAGCCTATAGGCAGTGTGAGTGTATCTGGCCACAAATTTGTGGGGTGCCCTATGCCTTGTGGTGTGCAAATAACTAGATTGGAGCACGTCAATGTTCTCTCCAGGAATGTGGAGTACCTAGCTTCTAGGGATGCCACAATTATGGGAAGTCGAAACGGACACGCTCCCATATTCCTCTGGTACACTTTAAACCGAAAGGGATACCGGGGTTTCCAGAAAGAAGTACAGAAATGCTTGAGGAATGCTCATTACTTGAAAGACCGCCTCAGGGATGCCGGTATCGGCGCAATGCTTAACGAGCTAAGCAGCACAGTCGTGTTCGAGCGGCCACACGATGAGGAGTTTACTCGCAGGTGGCAACTAGCATGCCAAGGCAACATCGCTCATGTTGTGGTGATGCCAAACATTACAATTGAGAAGCTAGACATATTTCTGGAGGAGCTCGTTCAGAAACGAGCCAAGTGGTTTGAAGACGGCAAGTGTCAGCCTCTTTGTGTTGCGTCTGACGTGGGTGAAAAGAGTTGCCTTTGTGCCTTGCACAAGTGA 1770 0.4418 MVHVSRFCQLSYREVDIDGHTLSEAGFSLGNPACSFFLSPIEPCCEFPEFSIEIMSGIIRMLRSVNDASLLRLMGICFSRKSECDMNRLLFSSHKGHYCARTSKMDRSVGIVIDESSIMKAIEPLPEDFDPTAVIKDPVPPIVENNGNGHAVNKMSEDKSKREIVLGRNVHTTCLEVTEPDADDEVIGDREAYMASVLARYRKSLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYTSRETHYSVFKAARMYRMECVKVDTHCTGEIDCDDFKAKIIRNKDKPAIVNVNIGTTVKGAMDDLDLVIKTLEEAGFSHDRFYIHCDGALFGLMMPFVKRAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHVNVLSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLRDAGIGAMLNELSSTVVFERPHDEEFTRRWQLACQGNIAHVVVMPNITIEKLDIFLEELVQKRAKWFEDGKCQPLCVASDVGEKSCLCALHK 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0514 589 Pfam Pyridoxal-dependent decarboxylase conserved domain 299 510 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lele13g0514 589 Gene3D - 228 471 IPR015421 GO:0003824
Lele13g0514 589 FunFam Serine decarboxylase 1 228 471 - -
Lele13g0514 589 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 413 434 IPR021115 GO:0016831
Lele13g0514 589 Gene3D Aspartate Aminotransferase, domain 1 472 560 IPR015422 GO:0003824
Lele13g0514 589 PANTHER - 152 589 - -
Lele13g0514 589 SUPERFAMILY PLP-dependent transferases 197 560 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0514 Lele-ChrLele13 17333885 17337207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0514 312 495 Calmodulin-binding Proteins AT1G65960 26.425 7.43e-09 56.2