Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0509 ATGGCAGATAATAAGCTCAGCCAAATTGATCCATCTTCTTCTCCAACCACTTCAAAATCCGACCTAGAAAAGCCTCACAGAAACCTTCAAGATGATCAGCAACATGAGAACGACGACGTCGTTGACTACATCCAAAGGGCCCAGTGGCTTCGAGCTGCCATTCTCGGAGCCAACGACGGCTTGCTCTCCACGGCGTCGCTCATTATGGGAGTCGAAGCCGTAAGGAAGGACGTCAAAACAATGATTCTCACCGGGGTTGCGGGTTTAGTTGCCGGAGCTTGTAGTATGGCAATCGGAGAGTTTGTATCAGTGTACTCGCAGTATGATATGGAGGGAGCTCAGTTGAAGAGAGAAAGAAAAGAGGTGGACAAAGCGAAGTTGCCCAATCCATTTTACGCGGCAGCAGCCTCGGCGATAGCGTTCTCAGTCGGGGCGGTGGTGCCGCTGCTCGGAGCGGCGTTTATAAAAGAATATAAGGTGAGGTTGGTGGTGGTGGTGGGTGTGGTGAGCCTGGCATTGTTAGGGTTCGGAGCGGTGAGTGCTATTTTGGGGAAAGCTCCAGTGGTGAAGTCGTCTTCTAGGGTTTTGGTTGGAGGGTGGCTCGCCATGGCAATCACTTTTGGCCTAACAAAGTCTGTCCATTCCATCATCTGTGTTTGA 660 0.5121 MADNKLSQIDPSSSPTTSKSDLEKPHRNLQDDQQHENDDVVDYIQRAQWLRAAILGANDGLLSTASLIMGVEAVRKDVKTMILTGVAGLVAGACSMAIGEFVSVYSQYDMEGAQLKRERKEVDKAKLPNPFYAAAASAIAFSVGAVVPLLGAAFIKEYKVRLVVVVGVVSLALLGFGAVSAILGKAPVVKSSSRVLVGGWLAMAITFGLTKSVHSIICV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0509 219 MobiDBLite consensus disorder prediction 1 19 - -
Lele13g0509 219 MobiDBLite consensus disorder prediction 1 36 - -
Lele13g0509 219 MobiDBLite consensus disorder prediction 20 36 - -
Lele13g0509 219 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 30 214 IPR008217 GO:0005384|GO:0030026
Lele13g0509 219 Pfam VIT family 126 210 IPR008217 GO:0005384|GO:0030026
Lele13g0509 219 Pfam VIT family 50 125 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0509 Lele-ChrLele13 17280521 17281180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0509 22 215 Nodulin-like Gene Family AT3G43660 65.641 6.24e-89 258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0509 13 17280521 17281180 Lele15g1961 15 12332745 12333395 hybridization
Lele13g0509 13 17280521 17281180 Lele16g1986 16 12144570 12145250 hybridization