Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0505 ATGGATCATGCGGCGGATGCTCAGAGGACCGATTTGCTGACCATCACTCGCTTCGTTCTGAACGAACAATCAAAGCACAAGCAATCGCGTGGCGATTTTACCATTCTCCTCAATCAAATCGTTCTTGGCTGCAAATTTGTCTGCTCTGCTGTTACCAAGGCAGGGCTGGCAAAAGTGCTTGGACTTGCTGGGCAGACCAATGTTCAAGGTGAAGATCAAAAGAAATTGGATGTTATCTCGAATGAAGTGTTTGTCAAGGCCTTAATTAGCAGTGGACGTACTTGCATTCTTGTTTCTGAAGAGAATGAAGATCCTATATTCGTGGAGCCATCACAACGTGGAAAATACATTGTTGTATTTGACCCTTTGGATGGATCTTCAAACATTGACTGTGGTGTTTCCATAGGAACTATCTTTGGCATTTATCTGGTGAAGGATCAGAATAATCCAACTCTTGATGATATTTTGCAATCTGGTAACAGCATGTTAGCAGCTGGTTACTGCATGTATGGAAGCTCTTGTACGTTAGTGCTAAGCACAGGGAATGGAGTGAATGGCTTCACACATGATCCTTCCCTTGGGGAATTCATATTGACACACCCAAATATCAAGATACCGAAGAAAGGAAAAATTTATTCCGTGAATGAGGGAAATGCTAAATATTGGGATGAACCAACTGCCAAATATGTAGAAAGCTGCAAGTATCCTCAAGACGGTTCACCACCAAAGTCTCTTAGATACATTGGAAGCATGGTTGCTGATATCCACCGTACATTGCTTTATGGTGGTATCTTCATGTACCCTGCTGATAAGAAAAGCTCAAGTGGAAAGCTCCGGGTTCTGTATGAAGTGTTTCCCATGTCATACTTGATGGAGCAAGCAGGAGGTCAAGCTTTTACAGGAAAGCAAAGGGCACTTGACTTGGTTCCAAAGAAAGTACACGATCGATCTCCAATATTCTTAGGCAGTTATGATGATGTCGAGCAAATTAAAGCTCTCTATGCTGCAGCAGAAGAAGCATCAAATGGAGAAATGGAAAAATAA 1044 0.4224 MDHAADAQRTDLLTITRFVLNEQSKHKQSRGDFTILLNQIVLGCKFVCSAVTKAGLAKVLGLAGQTNVQGEDQKKLDVISNEVFVKALISSGRTCILVSEENEDPIFVEPSQRGKYIVVFDPLDGSSNIDCGVSIGTIFGIYLVKDQNNPTLDDILQSGNSMLAAGYCMYGSSCTLVLSTGNGVNGFTHDPSLGEFILTHPNIKIPKKGKIYSVNEGNAKYWDEPTAKYVESCKYPQDGSPPKSLRYIGSMVADIHRTLLYGGIFMYPADKKSSSGKLRVLYEVFPMSYLMEQAGGQAFTGKQRALDLVPKKVHDRSPIFLGSYDDVEQIKALYAAAEEASNGEMEK 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0505 347 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 14 201 IPR033391 -
Lele13g0505 347 ProSitePatterns Fructose-1-6-bisphosphatase active site. 276 288 IPR020548 GO:0005975|GO:0042578
Lele13g0505 347 FunFam Fructose-1,6-bisphosphatase class 1 204 338 - -
Lele13g0505 347 PIRSF FBPtase_SBPase 9 340 IPR000146 GO:0005975|GO:0016791
Lele13g0505 347 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 3 336 IPR000146 GO:0005975|GO:0016791
Lele13g0505 347 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Lele13g0505 347 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Lele13g0505 347 PRINTS Fructose-1,6-bisphosphatase signature 186 209 IPR028343 GO:0042132
Lele13g0505 347 PRINTS Fructose-1,6-bisphosphatase signature 310 335 IPR028343 GO:0042132
Lele13g0505 347 PRINTS Fructose-1,6-bisphosphatase signature 212 239 IPR028343 GO:0042132
Lele13g0505 347 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Lele13g0505 347 SUPERFAMILY Carbohydrate phosphatase 8 334 - -
Lele13g0505 347 PIRSF FBPtase 9 339 IPR028343 GO:0042132
Lele13g0505 347 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 336 IPR000146 GO:0005975|GO:0016791
Lele13g0505 347 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 205 334 IPR044015 -
Lele13g0505 347 CDD FBPase 20 334 IPR000146 GO:0005975|GO:0016791
Lele13g0505 347 FunFam Fructose-1,6-bisphosphatase, cytosolic 4 203 - -
Lele13g0505 347 Gene3D - 4 203 - -
Lele13g0505 347 Gene3D - 204 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0505 Lele-ChrLele13 17241150 17245296 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0505 13 17241150 17245296 Lele13g0674 13 18838069 18838923 CCT
Lele13g0505 13 17241150 17245296 Lele14g0574 14 17254250 17255313 CCT
Lele13g0505 13 17241150 17245296 Lele15g1810 15 11000849 11001694 CCT
Lele13g0505 13 17241150 17245296 Lele16g1838 16 10950912 10951796 CCT
Lele13g0505 13 17241150 17245296 Lele15g1812 15 11022841 11027469 hybridization
Lele13g0505 13 17241150 17245296 Lele16g1841 16 10969909 10974292 hybridization