Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0494 ATGGCCGTACATCCGAAGCTCAAGCTGATTTGTTACTCACAAATTGTAGATGGGCAGCCAATTTTTGTTTCTTCTAATTGTACTCCTGTCAAGGCTTGGAAATTTGAACCTGCAGGTCATGCCTTCCATTCTGCTGCGCTTAAACTACTTGGTGTTGAGGAAGAAAAATTAGATGCTGATGATAAAAAAGTGGTTGATGATAATGAACAGAATTATTTTCCATCTGATTCTTATAGCAGCAAGAGTAAAAAGAAATCTGGTTCTGGAGACAAGCAACAAGATCACTATGCATTGTTGGGTTTGGCGCATCTAAGATACCTTGCTACAGAGGAACAAATACGTAAAAGCTATCGTGAAACTGCTTTGAGGTATCATCCTGACAAACAGGCGGCTCTACTTCTTGCTGAGGAGACTGAAGCTGCGAAGCAGGCTAAGAAGGATGAGATAGAAAGTCATTTTAAGGCAATCCAGGAAGCGTATGAAGTTTTGATTGATCCTGTGAAGAGAAGAATCTATGATTCCACAGATGAATTTGATGATGAGATCCCTACTGACTGTGCCCCACAAGACTTCTTCAAAGTGTTTGGTCCTGCATTTATGAGGAATGGGAGGTGGTCAGTTAATCAACCCATTCCATCTTTAGGTGACAACAACACTCCATTGAAAGAAGTTGATAATTTCTACAATTTCTGGTACACCTTTAAAAGCTGGAGGGAGTTTCCTCATGCTGATGAATTTGATCTTGAGCAAGCGGAATCTCGAGACCACAAGAGGTGGATGGAAAGGCAGAATGCAAAATTGTCAGAAAAAGCAAGGAAGGAAGAATCTGCACGCATACGCACTCTTGTTGATAATGCTTATAAGAGAGACCCTAGAATACTGAAGAGGAAGGAAGAGGAAAAAGCTGAGAAGCAAAGAAAAAAGGAGGCTAAGTTTCTTGCAAAGAGACTGCAGGAGGAAGAAGCTGCCAGAATTGCTGAGGAGGAGATGCGGCGAAAGGAGGAGGAAGAGAAACGTGCTGCAGAAGCTGCTTCACAACAGAAGAAATTGAAGGAGAAAGAGAAAAAGCTCTTGCGTAAAGAGCGCGCTCGTCTTCGAACACTTTCAGGACCTACTGTGTCACAAAATGAAATTGGTATATCTGAGGATGATGTAGAAAGTCTTTGCATGTCACTTGATACTGAGCAGCTGAGGTGTTTGTGTGAGAAAATCAATGGCCTACAGGTGTTAGAACAAGCAAAAGTTCTCAGAGATGCACGGGATTGCAAAAAAGATGGAGAAAATAAGAAAGGAGAAACAGCTGATCGACAGAATGGTTCTGTTAAGGCTAATGGTAGTGCCTCACTTGGAAACTTGGAGAAGAAGGAAAAACCTTGGAGTAGAGAAGAGATTGATCTATTAAGAAAGGGAATGGTAAAATATCCCAAAGGAACTTCCCGAAGGTGGGAGGTAGTTTCAGAGTATCTTGGTACTGGGAGGTCCGTGGAAGAAATTATGAAGGCAACAAAAACCGTTCTACTCCAGAAGCCTGATTCTTCCAAATCCTTTGATGCATTTCTTGAGAAAAGGAAACCTGCACAATCAATTGCATCTCCACTGACGACTAGAGCAGAATTAGAAGGGGAGACAGCTCCGGCGATCTCCCAAAGTAATGCTTCCTCAACAACAAATAACTCGGAAGACTCTAGCAGCAGCAAAATTGCTGACAACCAAGTCTCTCCTGGTTCTGTCACTGCAAATGGAGTATCCTCTAGTTCAGAGCAAGATGTCTGGTCAGCTGTACAGGAGAGGGCATTGGTTCAGGCTTTGAAAGCCTTCCCAAAGGAAACTTCCCAGAGATGGGAAAGGGTTGCAACAGCTGTCCCTGGAAAGACTATGAACCAGTGCAAGAAAAAGTTTACAATGATGAAGGAGAACTTCAGAAGCAAGAAAAATGCAGCTTGA 1944 0.4259 MAVHPKLKLICYSQIVDGQPIFVSSNCTPVKAWKFEPAGHAFHSAALKLLGVEEEKLDADDKKVVDDNEQNYFPSDSYSSKSKKKSGSGDKQQDHYALLGLAHLRYLATEEQIRKSYRETALRYHPDKQAALLLAEETEAAKQAKKDEIESHFKAIQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPIPSLGDNNTPLKEVDNFYNFWYTFKSWREFPHADEFDLEQAESRDHKRWMERQNAKLSEKARKEESARIRTLVDNAYKRDPRILKRKEEEKAEKQRKKEAKFLAKRLQEEEAARIAEEEMRRKEEEEKRAAEAASQQKKLKEKEKKLLRKERARLRTLSGPTVSQNEIGISEDDVESLCMSLDTEQLRCLCEKINGLQVLEQAKVLRDARDCKKDGENKKGETADRQNGSVKANGSASLGNLEKKEKPWSREEIDLLRKGMVKYPKGTSRRWEVVSEYLGTGRSVEEIMKATKTVLLQKPDSSKSFDAFLEKRKPAQSIASPLTTRAELEGETAPAISQSNASSTTNNSEDSSSSKIADNQVSPGSVTANGVSSSSEQDVWSAVQERALVQALKAFPKETSQRWERVATAVPGKTMNQCKKKFTMMKENFRSKKNAA 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0494 647 Gene3D DnaJ domain 77 186 IPR036869 -
Lele13g0494 647 MobiDBLite consensus disorder prediction 328 353 - -
Lele13g0494 647 MobiDBLite consensus disorder prediction 422 436 - -
Lele13g0494 647 SUPERFAMILY Chaperone J-domain 78 172 IPR036869 -
Lele13g0494 647 Pfam Myb-like DNA-binding domain 590 636 IPR001005 -
Lele13g0494 647 Gene3D - 452 509 - -
Lele13g0494 647 MobiDBLite consensus disorder prediction 422 455 - -
Lele13g0494 647 ProSiteProfiles SANT domain profile. 586 641 IPR017884 -
Lele13g0494 647 Coils Coil 300 368 - -
Lele13g0494 647 PRINTS DnaJ domain signature 117 132 IPR001623 -
Lele13g0494 647 PRINTS DnaJ domain signature 99 117 IPR001623 -
Lele13g0494 647 PRINTS DnaJ domain signature 148 168 IPR001623 -
Lele13g0494 647 FunFam Myb family transcription factor 585 645 - -
Lele13g0494 647 MobiDBLite consensus disorder prediction 544 590 - -
Lele13g0494 647 Pfam DnaJ domain 94 173 IPR001623 -
Lele13g0494 647 SUPERFAMILY Homeodomain-like 589 644 IPR009057 -
Lele13g0494 647 MobiDBLite consensus disorder prediction 61 91 - -
Lele13g0494 647 CDD DnaJ 94 165 IPR001623 -
Lele13g0494 647 CDD SANT 591 637 IPR001005 -
Lele13g0494 647 SMART dnaj_3 93 168 IPR001623 -
Lele13g0494 647 MobiDBLite consensus disorder prediction 527 590 - -
Lele13g0494 647 ProSiteProfiles dnaJ domain profile. 94 176 IPR001623 -
Lele13g0494 647 ProSiteProfiles Myb-like domain profile. 583 637 IPR001005 -
Lele13g0494 647 SUPERFAMILY Homeodomain-like 457 501 IPR009057 -
Lele13g0494 647 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 12 646 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Lele13g0494 647 ProSitePatterns Nt-dnaJ domain signature. 153 172 IPR018253 -
Lele13g0494 647 SMART sant 455 508 IPR001005 -
Lele13g0494 647 SMART sant 587 639 IPR001005 -
Lele13g0494 647 CDD SANT 458 500 IPR001005 -
Lele13g0494 647 Gene3D - 581 647 - -
Lele13g0494 647 ProSiteProfiles Myb-like domain profile. 451 506 IPR001005 -
Lele13g0494 647 MobiDBLite consensus disorder prediction 251 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0494 Lele-ChrLele13 17191493 17193436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0494 95 294 C2H2 Transcription Factor Family AT1G74250 28.033 5.24e-18 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele13g0494 DnaJ 9e-18 CL0392