Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0492 ATGATGTACGGAATTGTTGCAGATGCCCTTAAAAGAAATGGCCTGTCTGATCAATGTCATCCTCAAGATTATCTCAACTTTTATTGCCTTGGAAAGCGTGAACCTCAATCCAGTGAATGTTCCATATCTATGTCAACAGCTGACCGTGGGCTGCGATGCTGTTTACTTCAGAAAAGTTGGTGTGTGATGCAAAAGGATGAAAAGGCATCGGTTTACAAATATAGACGTTTTATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGATCACTTTGTAATCCTGGGATCTGCAAATATTAACCAAAGATCCTTGGATGGTTCAAGGGACACAGAAATTGCTATGGGTGCCTATCAGCCTCAATATACATGGGCAAGAAAAAATTCTCATCCGCATGGTCAGGTGTATGGTTACAGAATGTCACTCTGGGCTGAGCACCTTGGTGGTCTTGAGGATACTTTCAAGGAACCGGACAGCCTCGAATGTGTTCATCGCATGAATGAAATTGCCAGGAACAACTGGAGCGCATATGTATCTGAGGAAGAGAAGGAGATGAGGGGACACTTGATGCAGTATCCAGTTCAGATTGCCAATGATGGAAGAGTTAGTGCCTTGAAAGATTGGGAAAACTTCCCTGATGTTGGCGGTAAAATTCTTGGATCACCCAACTCTCTTCCTGATACACTAACCACATAA 696 0.4253 MMYGIVADALKRNGLSDQCHPQDYLNFYCLGKREPQSSECSISMSTADRGLRCCLLQKSWCVMQKDEKASVYKYRRFMIYVHAKGMIVDDHFVILGSANINQRSLDGSRDTEIAMGAYQPQYTWARKNSHPHGQVYGYRMSLWAEHLGGLEDTFKEPDSLECVHRMNEIARNNWSAYVSEEEKEMRGHLMQYPVQIANDGRVSALKDWENFPDVGGKILGSPNSLPDTLTT 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0492 231 Gene3D Endonuclease Chain A 51 141 - -
Lele13g0492 231 Pfam PLD-like domain 65 113 IPR025202 -
Lele13g0492 231 Pfam Phospholipase D C terminal 151 221 IPR024632 -
Lele13g0492 231 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 77 104 IPR001736 GO:0003824
Lele13g0492 231 PANTHER PHOSPHOLIPASE D 1 220 IPR015679 -
Lele13g0492 231 SMART pld_4 77 104 IPR001736 GO:0003824
Lele13g0492 231 SUPERFAMILY Phospholipase D/nuclease 47 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0492 Lele-ChrLele13 17181122 17182700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0492 1 230 Phospholipase D Gene Family (Wang group) AT4G11850 52.609 5.71e-79 251