Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0491 ATGGCTTCCATGTGTCCCCTGCCAGTTCCCGCCATTTTCGGCTCAGAGAAACTCTCTCCAGCTCCTCCTTCTCCTTCCCATTACGGTAATGATCCACGCTTTATCTCTCTTCCGATGAAACGTTTTCTGAATACAAGCTTTGTTGTTCTTTTATTTGTCGATCTTCTGGCCCAACTTCCTCATATCGTTTCCAGTTCTCCATTTGAAGTGGGCAGTCAAGGTGACAAGCCCCAGAATGAGGGGCTTAAAAGTGGCCTTAAAGAACCAACTTTATTGTATGGTGACTTGGATCTGTATGTATTAGAGGCAAAAAATCTTCCAAATTTGGATCTTTCTTCAGAAACCATGAGAAAATGTTTCACTATGGGTAATACTTGCAACCCTCCCTTCATGAAAGCACGCAGGATAAGCACTGGGAAATATCATGTAGATACTAGTGATCCCTATGTCTCTGTCGTTCTAGCAGGGGCTACTGTAGCGCAAACTCGAGTAGTTCGTAACAATGAGCATCCTTCCTGGAATGAGCATTTTATTGTTCCAGTGGCTCACGCTGCTGAAAAAGTGGAGTTTATTGTGAAAGATGATGATGCTCTTGGGGCCGAAATCATTGGAGTCGTAGAGATACCTGCTCAAAAGATTTTTTCTGGAAATATTATTAATAATTGGTTTCCAATCACTGGTGGGTACTCGATTTGCTCAAAAGGTACACCTGAGTTACATATCTCTATTCAGTATAAGTCATTTGGATCAGACCCTGCAGACAAATTTGGCATTGGAGCTGTAGCAGATTATCCAGGTGTTCCTAACACGTATTTTCCTCCTCGAAAAGGAGGGAAAGTGACTCTTTATCAAGATGCACATGTACCAGATGGCAAACTACCTGAAATTCCACTTGAGGAGGGAAAAGTCTTTCAGCAGGGTAAATGTTGGGAGGATATTTGCCATGCAATTTCGGAAGCTCAAGAGCTGATATACATTGTAGGATGGTCTGTTTATCACCCTGTAAAGCTTGTCAGAGAACCAACAAGACCCTTGCCTGCTGGAGGAGAGCTTTCGCTTGGAGAGTTGTTGAAATATAAGTCACAAGAAGGTGTCCGCGTGGTCATGCTGATCTGGGATGACAAAACTTCGCATGACAATTTTTTTTTGAAAACAGTACTTCTGATTACCCTAATGATAAAATGA 1185 0.4236 MASMCPLPVPAIFGSEKLSPAPPSPSHYGNDPRFISLPMKRFLNTSFVVLLFVDLLAQLPHIVSSSPFEVGSQGDKPQNEGLKSGLKEPTLLYGDLDLYVLEAKNLPNLDLSSETMRKCFTMGNTCNPPFMKARRISTGKYHVDTSDPYVSVVLAGATVAQTRVVRNNEHPSWNEHFIVPVAHAAEKVEFIVKDDDALGAEIIGVVEIPAQKIFSGNIINNWFPITGGYSICSKGTPELHISIQYKSFGSDPADKFGIGAVADYPGVPNTYFPPRKGGKVTLYQDAHVPDGKLPEIPLEEGKVFQQGKCWEDICHAISEAQELIYIVGWSVYHPVKLVREPTRPLPAGGELSLGELLKYKSQEGVRVVMLIWDDKTSHDNFFLKTVLLITLMIK 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0491 394 Pfam C2 domain 94 225 IPR000008 -
Lele13g0491 394 PANTHER PHOSPHOLIPASE D 90 384 IPR015679 -
Lele13g0491 394 Gene3D C2 domain 93 255 IPR035892 -
Lele13g0491 394 SMART C2_3c 95 222 IPR000008 -
Lele13g0491 394 CDD C2_plant_PLD 89 245 - -
Lele13g0491 394 ProSiteProfiles C2 domain profile. 77 223 IPR000008 -
Lele13g0491 394 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 91 246 IPR035892 -
Lele13g0491 394 SUPERFAMILY Phospholipase D/nuclease 265 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0491 Lele-ChrLele13 17171865 17173881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0491 91 385 Phospholipase D Gene Family (Wang group) AT4G35790 48.860 4.98e-96 300