Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0486 ATGGAGAAGTACGAGCTAGTGAAGGACATAGGATCTGGGAATTTCGGGGTTGCCAAGCTGATGCGCAATAAAGATACCAAGGAGCTTGTTGCCATGAAATACATTGAACGAGGTCACAGGATCGATTTGAATGTAGCCAGGGAAATCATAAACCATAGATCTCTTTGCCATCCGAACATAATTCGGTTCAAGGAGGTGTTTTTGACTCCAACACATCTTGTAATAGTCATGGAGTATGCAGCTGGTGGAGAGCTTTTTGATCGAATTTGCTCTGCTGGAAGATTCAGTGAAGATGAGGCTAGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGCCATTCTTTGCAAATCTGCCATCGAGACTTGAAGCTGGAGAATACCTTATTGGATGGCAGCCCTGCTCCACGTCTGAAAATTTGTGATTTTGGTTATTCTAAGTCATCTCTACTTCATTCAAGGCCAAAATCAACTGTGGGAACTCCAGCCTATATTGCACCAGAGGTTCTTTCACGGAGAGAATATGATGGAAAGTTGGCTGATGTATGGTCCTGTGGAGTAACTCTTTATGTGATGCTGGTGGGAGCATACCCATTTGAGGACCCAGATGATCCTAAGAACTTCAGAAAAACCATAAATCGGATTATGTCTGTTCAATACAAGATCCCAGAATATGTACACATATCTCAAGACTGTAAGTTTCTGCTATCGCGCATTTTTGTGGCCAATCCTGCGAAGAGAATAAACATGAAAGAAATCAAGTGCCACCCATGGTTTTTAAAGAGCCTGCCAAGGGAATTGACAGAAACAGCCCAAGCTGTCTACTTCAAGAGAGAAAACCCAACATTTTCTCTTCAGAGTGCAGAAGACATAATGAAAATTGTTGAAGAGGCCAAAACTCCACCCTCAGGTTCTAAGTCAGTCGGAGAGTTTGGTTGGGTAGAGGAAGGAGGAGAGGAAGGTGAAGGAGAAGAAGAAGACAAAACAAATGCGGAGGCAAATGGTGAGGAGGAAGATGAGTATGAAAAGAGAGTCAAGGAGGCACAGACGAGCGGCGAAGTTAATGTAAGCTAA 1077 0.4336 MEKYELVKDIGSGNFGVAKLMRNKDTKELVAMKYIERGHRIDLNVAREIINHRSLCHPNIIRFKEVFLTPTHLVIVMEYAAGGELFDRICSAGRFSEDEARYFFQQLISGVSYCHSLQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDPDDPKNFRKTINRIMSVQYKIPEYVHISQDCKFLLSRIFVANPAKRINMKEIKCHPWFLKSLPRELTETAQAVYFKRENPTFSLQSAEDIMKIVEEAKTPPSGSKSVGEFGWVEEGGEEGEGEEEDKTNAEANGEEEDEYEKRVKEAQTSGEVNVS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0486 358 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0486 358 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
Lele13g0486 358 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0486 358 SUPERFAMILY Protein kinase-like (PK-like) 2 290 IPR011009 -
Lele13g0486 358 MobiDBLite consensus disorder prediction 300 358 - -
Lele13g0486 358 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0486 358 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Lele13g0486 358 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Lele13g0486 358 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele13g0486 358 MobiDBLite consensus disorder prediction 316 337 - -
Lele13g0486 358 PANTHER SERINE/THREONINE KINASE 2 308 - -
Lele13g0486 358 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Lele13g0486 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Lele13g0486 358 CDD STKc_SnRK2 3 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0486 Lele-ChrLele13 17142280 17146679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0486 3 260 CBL-interacting serine-threonine protein kinases AT5G35410 43.446 1.84e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele13g0486 Pkinase 5e-70 CL0016