Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0482 ATGGATGTCGCTATAGATGGATCCGATCATGGAAGGATGGTTTTTGAGCTATTCTATGACATTGTTCCCTTCACTGCAGAAAATTTCCGTGCGTTGTGTACAGGAGAAAAGGGAGTTAGTCCCAAAACCAATAAGCCCCTGACTTACGCAAGATCTTTGTTTCACAAGGTTAAGAAAGGTAGCTCCTATGTTAAGGGAGGTGCTTTTTGCTATGAAACTGGGGAAGGTGGAGAAAGCATTTATGGTTCACATTTCCAAGTGCACGAGTCAAATAGCCTCAAGCATGACAGAGAAGGGCTGTTAACCATGTCTAGAGATCAGTTAGCTTCTTCTTCTCATTTTTTAATCACATCTAGAGCTGATCATACTCTGGACAGTTCTCATGTGATTTTTGGGAAGGTTATGCAAGGGATTGGTACAGTAGGGGCAATTGCAGAATATTGTTCGCTGGTCCCGGTTAGAATTGTGGGTTGTGGTCTGGTATATAATGTGAGTGATATTCCTCGTGGCGTGATTGTGTGGCCTTGTTGGCCGCCTCAAAGCGAAGTAAAGGAAAAGAAAAGGAAAGAAGGGAAGAAGAAAGAGTGGAAAGAAATAAAGGCTCCTTGTTTACGTAAATAG 621 0.4251 MDVAIDGSDHGRMVFELFYDIVPFTAENFRALCTGEKGVSPKTNKPLTYARSLFHKVKKGSSYVKGGAFCYETGEGGESIYGSHFQVHESNSLKHDREGLLTMSRDQLASSSHFLITSRADHTLDSSHVIFGKVMQGIGTVGAIAEYCSLVPVRIVGCGLVYNVSDIPRGVIVWPCWPPQSEVKEKKRKEGKKKEWKEIKAPCLRK 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0482 206 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 146 IPR002130 GO:0000413|GO:0003755
Lele13g0482 206 SUPERFAMILY Cyclophilin-like 1 166 IPR029000 -
Lele13g0482 206 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 158 IPR002130 GO:0000413|GO:0003755
Lele13g0482 206 Gene3D - 1 166 IPR029000 -
Lele13g0482 206 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 159 - -
Lele13g0482 206 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Lele13g0482 206 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Lele13g0482 206 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 IPR002130 GO:0000413|GO:0003755
Lele13g0482 206 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Lele13g0482 206 MobiDBLite consensus disorder prediction 182 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0482 Lele-ChrLele13 17083423 17085411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0482 8 144 U-box Gene Family AT5G67530 29.710 4.39e-11 59.7