Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0478 ATGTCACTAGATCGGGCTGGCTTGGCATGTCCATCGCCAACACTAAGTGGGGGAATAACATGTGTGATATCAGACTTAGATCTCTACGAGGTTATTAATTTGAGCTCTGAAAACAAAACTACGGATTTCCAAAAGATGAAGCAAGTTGATGATGGATCATCATCATCATCATCTAGCAAAAAGATTCCAAACAAGTTGTTTGACTTGAATCTGTTGCCAGAAGAAGAAGAAAATGATGAGTTTGACATTGAAATATTTGGAAGTTTTGAAACCCCTCAAGCTGCTCTGAATCTCACTGATAATAATCATGAAGTGCATGCAAATTCAAATGGATTGGTTGTCCCTCCATTTCCTACTTCTGGAGCTGGAACCAACAATGGTACTGCTTCCATCTTCAACAACACCACAACTTCATCTGCAGCAACAGAAATGGTGACACCCTCCAATCATCCTTTTGATCATAAGAGGAGAGTTCGCCACAACGACGGCTTTTCAGCCAGTACTGGAACTGCAAGGAGCTTATGCCCTCGCCGGCCGGAGCCAAACTATGACCAGCGAATCTGCACAAATTACAGTTGCCGCACAAGAAACACTCCTATGTGGCGTAGGGGGCCTCTTGGTCCAAAGTTTTCTTCTTTCGTTTTCCTGCATTTTCTTGCTTGGAAAATGGGAGAACCTCTTAAGACACCAAGAACACCAACGTTGGACCTGCACAACATCTTCTTTATTCCAAAGACTGTGTCTTTGAAAGAAATTGGAAAGGCTTACAAAAGTCTGGTAACAAAGAAGCATTCTGATAAAAGTTCTCGCAAGGAGAAACACACCGAGGACCCAGCTGCAACACCTCCAGGTTCAGGGATTCATCGTCATTCTGGTCATGAAGATGATAATGATTTATTCACAAGTCCGGCAATTTTGTCAAGAAATGCAAGTAGAAGATCAAAAACACCAACACCAACTAGAAGCTACATTTCAAAAAACCCAAGCAGACGAAGCAAAACACCTAACCCTGTATCAAGAAGTTCGAGTGCAAGTTTTGTCTCGGAATCAGAAAGATCTGGGAATGTGAGCAGAAGAAGAGGTACCTCCATTGTTGAACCTTCAAGCAGTACTACTGCAGATTCCTTGTCAAGAAGCAGAAGCAGAGCCAGACATTTTGCGTCTGAACCTCAGACACAAGGCCCGAGCTCTGTAGCCTCCTCTCCGTCAAGAGACGCCGGCAGCACCAACAGGTCATCAGCAAGTGACATCCCGGCAGCCTCTCTGTCAAGAGACATGAGCCGCAGGTCCACGACACCTATCATATTCTCACAATCAACTGTTAGAAGGAAACCCCCACCAACAGAGAAGAATCTGGAGTGCACACTTGAAAATTTATACTTTGGATGCATCAAAAAGATCAAAATTACTAGAGATGTTATCAAGCCTCCCGGGGTTATCCTCCAACAGGAGGAGGTGCTACAGATTGAAGTAAAGCCAGGATGGATAAAAGGAACGAAGATTACCTTCGAGGACAAGGGTAACGAAGAACCCGGATACCTCCCTGCTGATATAATCTTCTCAATTGAAGAAAAGGAACACCCTTTGTTTACCAGGGATGGTAACAATTTGGAAGTATGTGTTGAGATCCCCTTAGTAAATGCACTCACTAGCTGCATAATACCAGTTCCTCTGATTGAAGGCGAAACGATGAATGTGTCATTTGAGAATATTGTCATATATCCTGGATATGTGAAGGTTATTCAAGGTAAAGGCATGCCAGATCCACAACATAACGGGCGGAGAGGCGACCTGCATATCAGATTCCTCATCGACTTCCCTAAAACATTGAGTGATGAACAAAAGGAAGAAGTTGTTAGTATTCTACAAGATTGTAACTGA 1881 0.4338 MSLDRAGLACPSPTLSGGITCVISDLDLYEVINLSSENKTTDFQKMKQVDDGSSSSSSSKKIPNKLFDLNLLPEEEENDEFDIEIFGSFETPQAALNLTDNNHEVHANSNGLVVPPFPTSGAGTNNGTASIFNNTTTSSAATEMVTPSNHPFDHKRRVRHNDGFSASTGTARSLCPRRPEPNYDQRICTNYSCRTRNTPMWRRGPLGPKFSSFVFLHFLAWKMGEPLKTPRTPTLDLHNIFFIPKTVSLKEIGKAYKSLVTKKHSDKSSRKEKHTEDPAATPPGSGIHRHSGHEDDNDLFTSPAILSRNASRRSKTPTPTRSYISKNPSRRSKTPNPVSRSSSASFVSESERSGNVSRRRGTSIVEPSSSTTADSLSRSRSRARHFASEPQTQGPSSVASSPSRDAGSTNRSSASDIPAASLSRDMSRRSTTPIIFSQSTVRRKPPPTEKNLECTLENLYFGCIKKIKITRDVIKPPGVILQQEEVLQIEVKPGWIKGTKITFEDKGNEEPGYLPADIIFSIEEKEHPLFTRDGNNLEVCVEIPLVNALTSCIIPVPLIEGETMNVSFENIVIYPGYVKVIQGKGMPDPQHNGRRGDLHIRFLIDFPKTLSDEQKEEVVSILQDCN 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0478 626 MobiDBLite consensus disorder prediction 260 278 - -
Lele13g0478 626 FunFam DnaJ subfamily B member 13 527 608 - -
Lele13g0478 626 Gene3D - 443 525 - -
Lele13g0478 626 Gene3D - 526 625 - -
Lele13g0478 626 MobiDBLite consensus disorder prediction 302 377 - -
Lele13g0478 626 MobiDBLite consensus disorder prediction 260 449 - -
Lele13g0478 626 SUPERFAMILY HSP40/DnaJ peptide-binding domain 530 616 IPR008971 GO:0006457|GO:0051082
Lele13g0478 626 FunFam Dnaj homolog subfamily b member 444 525 - -
Lele13g0478 626 SUPERFAMILY HSP40/DnaJ peptide-binding domain 441 537 IPR008971 GO:0006457|GO:0051082
Lele13g0478 626 Pfam DnaJ C terminal domain 449 607 IPR002939 -
Lele13g0478 626 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 236 623 - -
Lele13g0478 626 MobiDBLite consensus disorder prediction 386 445 - -
Lele13g0478 626 CDD DnaJ_C 446 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0478 Lele-ChrLele13 17021762 17032959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0478 188 209 C2C2-Gata Transcription Factor Family AT3G20750 77.273 6.98e-06 45.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0478 13 17021762 17032959 Lele13g0478 13 17021762 17032959 ECH