Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0451 ATGGACGCCAACCACCACCACAAGCTTGTGAAGACTAAGCTTGAGCGCCGAAACGCCAGGAAGAACATCGATTACCAAGCTCCCACTACCACCTCATACGACGACGTCGTTTCTCTCGACCTTTTAGGCCAAACCAGCTTCAGGTTAAAGGGCTTCGACGGCGAATTCGATCTTCTTCTACGCGGTTTAGGACTTTCTGGACCAGAAGCCTTCGAAATCCCAGCTGCAGAATGGAAAGCCCGAGAAGTTCGCTCTATCCATAGTAATAGTAACCCACTTGGTAAAAAAGCCCGAGATGAAATTCCAATTTCTGCTGAATTTCAACGCTGGGTTGAAACTAATAATGATATAGAGCTGAAAGGTAAGAACTTTCAACCTGGGGTGGAAAGGAATATTACTTTTGCTTATTCTAATTCGAATGCTTTGGGGTCCAATCGGGATGGTGGTGGTGGAATCAAAAGTGTTAGGCCAACTGTTATATTGCCGCCGCCGCCAGAGATAGTGCGGCGGCCAATTGTTGATAGGGTTATTGATTCACCAATTCAAGTTAGGGGCTTTAGTTCTTCTGGTGAAGATGAAGTGAGGGTCCCTAAAATTAATGAGGAGGGTGTTGACAGAGATGGCGGCAGCAGCGGTGGCGGCGATACTGGTGTGGTTGATGAGTCAGTTCATAATCTCTCACCATATGGGTCATTTAGATGCACTTTCTCCTCTTGGCAAAAGGGGGAGATTCTGGGAAAGGGGTCATTTGGTACAGTTTATGAAGGCTTTACAAGTGATGGGTTCTTCTTTGCAGTGAAGGAGGTTTCTTTGTTGGATCAAGGTAGCCAGGGAAAACAGAGCATTTCCCAACTTCAGCAGGAAATATCTCTCTTGAGTCAGTTTGAACATGAAAACATAGTTCGATATCTTGGTACAGACAAGGATGAAAGTACACTATACATCTTCCTTGAGCTTTTAACAAAAGGGTCATTGGCAAATCTCTATCGAAAGTATCATTTAAGGGATTCTCAAGTTTCTGCATACACGTGGCAAATTTTAAGTGGCTTGAAGTATCTTCATGATTGTAATGTGGTTCACAGGGACATCAAGTGTGCTAATATATTGGTTGATGCAAGTGGATCAGTAAAGCTTGCAGATTTTGGATTGGCAAAGGCAACTAAATTTAATGATCTTAGATCAAGCAAAGGCTCCCCTTACTGGATGGCCCCTGAGGTTGTAAATTTAAAGAGCCATGGTTATGGACCAGCAGCCGATATATGGAGCCTAGGATGTACGGTTCTGGAGATGTTGACACGGCAACCTCCTTACTCTGAATTGGAAGGGATGCAAGCATTATTTCGGATTGGCAGGGGTGAACCTCCACCGATTCCCGAATCAATATCGAAAGATGCGCGAGATTTTATTCGAAGATGCATACAAGTTAACCCTGACAGACGACCAACTGCAGCTATGTTGTTGGAACATTCATTTGTAAAGAGGAAATTCTTGCCTCCAAAAAGTCCCTCTTCTCTGCTTGGTGGGAGAAACTAA 1533 0.4423 MDANHHHKLVKTKLERRNARKNIDYQAPTTTSYDDVVSLDLLGQTSFRLKGFDGEFDLLLRGLGLSGPEAFEIPAAEWKAREVRSIHSNSNPLGKKARDEIPISAEFQRWVETNNDIELKGKNFQPGVERNITFAYSNSNALGSNRDGGGGIKSVRPTVILPPPPEIVRRPIVDRVIDSPIQVRGFSSSGEDEVRVPKINEEGVDRDGGSSGGGDTGVVDESVHNLSPYGSFRCTFSSWQKGEILGKGSFGTVYEGFTSDGFFFAVKEVSLLDQGSQGKQSISQLQQEISLLSQFEHENIVRYLGTDKDESTLYIFLELLTKGSLANLYRKYHLRDSQVSAYTWQILSGLKYLHDCNVVHRDIKCANILVDASGSVKLADFGLAKATKFNDLRSSKGSPYWMAPEVVNLKSHGYGPAADIWSLGCTVLEMLTRQPPYSELEGMQALFRIGRGEPPPIPESISKDARDFIRRCIQVNPDRRPTAAMLLEHSFVKRKFLPPKSPSSLLGGRN 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0451 510 Pfam Protein kinase domain 240 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0451 510 FunFam Mitogen-activated protein kinase 1, putative, expressed 237 504 - -
Lele13g0451 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 358 370 IPR008271 GO:0004672|GO:0006468
Lele13g0451 510 ProSitePatterns Protein kinases ATP-binding region signature. 245 267 IPR017441 GO:0005524
Lele13g0451 510 ProSiteProfiles Protein kinase domain profile. 239 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0451 510 Gene3D Transferase(Phosphotransferase) domain 1 321 498 - -
Lele13g0451 510 MobiDBLite consensus disorder prediction 200 220 - -
Lele13g0451 510 SUPERFAMILY Protein kinase-like (PK-like) 225 500 IPR011009 -
Lele13g0451 510 Gene3D Phosphorylase Kinase; domain 1 221 320 - -
Lele13g0451 510 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 201 495 - -
Lele13g0451 510 SMART serkin_6 239 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0451 Lele-ChrLele13 16754405 16758093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0451 13 494 MAP Kinase Kinase Kinase AT4G08500 45.070 5.60e-133 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele13g0451 Pkinase 8.7e-70 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0372 14 15381455 15385575 Lele13g0451 13 16754405 16758093 CCT
Lele13g0449 13 16729283 16732878 Lele13g0451 13 16754405 16758093 CCT
Lele13g0451 13 16754405 16758093 Lele13g0451 13 16754405 16758093 ECH