Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0450 ATGGATCTCTCTTTGAAGATTGATCAATATCATGCTCAACACGAAAAAGAAGCAGATCACAAGGTAGAAGAAGAAGATCATGATGATGATAAGGAAGAAATTATGGCAAGAACAGTGAAGGTTGACGAAGAAGAAGCTCCTCATCATCATGAAGCCTCCATAGCTGCAGGAGATCAGAAAGAAGAACAACAAGAAGAAGATGATGATCATAATGGATCACTGGTAGAGAACACTAAAACAAGAGAGGAGTTAAGTGCGTTACAAGTGGAGACAGATCGAATGAAGGAAGAAAACAAAGTTTTAAGGAAAGTGGTGGAGCGAACGATGAAAGAGTTCTACGATCTTCAGATGAAGTTCGCAATCATCCAGCAGAACCACAACAACAAACACAAGGACCCTCAGATATCTGTCCCACTTCAAAACAATGGAAATCCCGGTGGTGAGGATGATCGTGTTAGCAAGATTGGATTGGGGTTATCACTGAGGTTACAGACAAGTGAACCAGAAGATGATCAAAGAAGGGAAGGAGATCAAGAGTATAAGAATGATAAGGAATTATTAGAATTGACAAGTTTTGGAACATTATCATCAGTTCAAAACAAAGTACCTCGGACTATTCATCACGAGTCGCCTGGTATGAGTAATGCCCATAATAATGTTGCTTCTTCTTCACCACCAAATAGGAAGGCTAGGGTTTCTGTTAGAGCAAGATGTGAAGCAGCCACTATGAATGATGGGTGTCAATGGAGAAAATATGGACAAAAGATTTCTAAAGGGAATCCATGTCCCCGTGCCTATTATCGTTGCACTGTTGCGCCCGGCTGTCCCGTGAGAAAACAGGTGCAGAGATGCTTAGAGGACACGTCGATACTAATAACAACGTACGAAGGAACACACAACCATCCTCTTCCCGTGGGTGCAACAGCCATGGCTTCCACTGCTTATGCTGCTCACTACAACAACACCAACTTCCTCCCATCATCAAATCCTAATAATATCATTGACCCTTCCAAAGGACTTGTCCTCGATCTTACCTCAACCTCATCTTCATCATCGCCCAGATTTTCTTGGCCGCCGCCAAATAATTTTGCCAGTAGTTCTGCAGAAGAAAATAATCAGAGTACTACTGTATCTGCCATTGCTTCAGATCCTAAGTTTAGGGTTGCTGTGGCGGCTGCAATAACTTCCTTCATTAATAGCAACACAGACATCAATCATCATAGTACTGTTCTTAATAATAATCCTTCAGGTACAACGTCGTTGTCCACTTCTTTCGTTGGTGCCGGCAATAATGGAAGCTCTAATGGCAGTAGCAGCAGCAACAGATGGATCTTAGAGTCCCTCTCATCATCATCACCAAAAGGGAAAACCCACCAGTTTTAA 1383 0.423 MDLSLKIDQYHAQHEKEADHKVEEEDHDDDKEEIMARTVKVDEEEAPHHHEASIAAGDQKEEQQEEDDDHNGSLVENTKTREELSALQVETDRMKEENKVLRKVVERTMKEFYDLQMKFAIIQQNHNNKHKDPQISVPLQNNGNPGGEDDRVSKIGLGLSLRLQTSEPEDDQRREGDQEYKNDKELLELTSFGTLSSVQNKVPRTIHHESPGMSNAHNNVASSSPPNRKARVSVRARCEAATMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDTSILITTYEGTHNHPLPVGATAMASTAYAAHYNNTNFLPSSNPNNIIDPSKGLVLDLTSTSSSSSPRFSWPPPNNFASSSAEENNQSTTVSAIASDPKFRVAVAAAITSFINSNTDINHHSTVLNNNPSGTTSLSTSFVGAGNNGSSNGSSSSNRWILESLSSSSPKGKTHQF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0450 460 MobiDBLite consensus disorder prediction 166 183 - -
Lele13g0450 460 MobiDBLite consensus disorder prediction 127 147 - -
Lele13g0450 460 Coils Coil 77 104 - -
Lele13g0450 460 ProSiteProfiles WRKY domain profile. 238 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g0450 460 MobiDBLite consensus disorder prediction 1 91 - -
Lele13g0450 460 MobiDBLite consensus disorder prediction 211 229 - -
Lele13g0450 460 Gene3D WRKY domain 228 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele13g0450 460 MobiDBLite consensus disorder prediction 127 183 - -
Lele13g0450 460 SUPERFAMILY WRKY DNA-binding domain 236 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele13g0450 460 SMART WRKY_cls 243 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g0450 460 MobiDBLite consensus disorder prediction 198 231 - -
Lele13g0450 460 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 47 407 IPR044810 GO:0003700
Lele13g0450 460 MobiDBLite consensus disorder prediction 349 370 - -
Lele13g0450 460 Pfam WRKY DNA -binding domain 244 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g0450 460 FunFam probable WRKY transcription factor 31 228 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0450 Lele-ChrLele13 16744650 16749409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0450 55 337 WRKY Transcription Factor Family AT1G68150 47.826 7.43e-73 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele13g0450 WRKY 3e-24 CL0274