Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0449 ATGACTACCAGGCCTAATCATCAACTGCCTCGTCGCATAGAGGAGAGACCACTCCAGAACGGAGACCACCGCCCACGGCAATCGGCACTCCCCAACGGAGACCACCGCCCACGGCAACTGGCATTCCCCAACGGAGACCACAGGCCACGGCCACCAGTACCTGCACCGGCGGCGCCGCCGCCATCACAGCCATCGTCTTCAGGTGGGAACCACCCCCAACCCCAACCCCAACCCCAAACACAACATCACCGCAATTACTACCCACCGCCACCGACGCCGTACCGGCCGTCGTCTTCCGCCTCCTTTAAAGGCTGTTGTTGTTGTCTCTTCCTCCTCTTCTCCTTCCTTGCTCTCCTCGTTCTAGCTATAGTACTTGTTATCATCCTTGCCGTGAAGCCCAAGAAGCCTCAGTTTGATCTCCAGCAAGTAGGCGTTCAATACATGGGGATAACGCCATCCTCCGTCGCCGGCGTCGCCTCCAACGACGCTACCGGCACCGCCGCTTCGCTGTCCCTCACAATCCGGTTGCTCTTCACGGCGGTGAACCCTAACAAGGTGGGGATCAAGTACGGCGAGTCCAGATTCACCGTCATGTATAGGGGAATCCCGTTGGGCAAAGCTTCGGTGCCTGGATTCTATCAAGAAGCTCACAGTGTAAGACAGGTCGTGGCCACCATTTCTGTTGATCGGGTCAATTTGCTTCAGGCCGACGCCGCCGATTTAATCCGAGATGCTTCGCTCAATGACAGGGTCGAGTTACGGGTCTTGGGCGACGTTGGAGCTAAGATCCGAGTGATGAACTTCGACTCCCCTGGCGTTCAGGTTTCAGTGGATTGTGCTATAGTGATCAGTCCAAGGAAGCAAACTCTGACATACAAGCAATGTGGATTCGATGGACTGAGTGTTTGA 909 0.5622 MTTRPNHQLPRRIEERPLQNGDHRPRQSALPNGDHRPRQLAFPNGDHRPRPPVPAPAAPPPSQPSSSGGNHPQPQPQPQTQHHRNYYPPPPTPYRPSSSASFKGCCCCLFLLFSFLALLVLAIVLVIILAVKPKKPQFDLQQVGVQYMGITPSSVAGVASNDATGTAASLSLTIRLLFTAVNPNKVGIKYGESRFTVMYRGIPLGKASVPGFYQEAHSVRQVVATISVDRVNLLQADAADLIRDASLNDRVELRVLGDVGAKIRVMNFDSPGVQVSVDCAIVISPRKQTLTYKQCGFDGLSV 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0449 302 Gene3D - 130 277 - -
Lele13g0449 302 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 58 296 - -
Lele13g0449 302 MobiDBLite consensus disorder prediction 1 94 - -
Lele13g0449 302 Pfam Late embryogenesis abundant protein 180 275 IPR004864 -
Lele13g0449 302 MobiDBLite consensus disorder prediction 68 82 - -
Lele13g0449 302 MobiDBLite consensus disorder prediction 8 22 - -
Lele13g0449 302 MobiDBLite consensus disorder prediction 47 67 - -
Lele13g0449 302 FunFam Harpin-induced protein 129 279 - -
Lele13g0449 302 SUPERFAMILY LEA14-like 119 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0449 Lele-ChrLele13 16729283 16732878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0449 78 293 EF-hand Containing Proteins AT5G21130 24.889 3.55e-08 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0449 13 16729283 16732878 Lele13g0451 13 16754405 16758093 CCT
Lele13g0449 13 16729283 16732878 Lele13g0449 13 16729283 16732878 ECH