Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0448 ATGTCTCACAGGAAGTTTGAGCACCCAAGGCATGGTTCCCTTGGCTTTCTCCCCAGGAAGCGTGATGCTCGTCATCGTGGAAAGGCAAAGGCTTTCCCAAAGGATGATCCCAGCAAACCTTGCAGATTGACTGCCTTTATGGGTTACAAGGCTGGGATGACCCACATCGTTAGAGAAGTTGAGAAACCTGGATCAAAGCTTCATAAGAAGGAGACTTGTGAGGCTGTTACCATTGTTGAAACTCCTCCAATGGTTGTTGTTGGAGTTGTTGGATACATGAAGACACCTCGTGGACTACGCACGTTAAATACAGTCTGGGCTCAGCATCTAAGTGAGGAACTTAAAAGGAGGTTCTACAAGAACTGGTGCAAGTCTAAGAAGAAGGCATTTACCAAGTATTCAAAGAAACATGAAACTGAGGAAGGAAAGAAGGATATTCAAGCACAGCTTGAAAAATTGAAGATATATGCATCTGTCATCCGTGTTTTGGCCCATACTCAGATACGAAAGGTGAAGGGTCTAAAGCAAAAGAAGGCACATCTGATGGAGATCCAAGTTAATGGTGGGACAATAGCGCAGAAGGTGGACTATGCATATGGCTTCTTTGAGAAGCAAATCCCAGTGGATGCTGTTTTCCAGAAAGATGAGATGATAGATATCATTGTTGTGACCAAGGGTAAAGGTTATGAAGGTGTTGTTACTCGTTGGGGTGTCACTCGCCTTCCTCGCAAGACACACGGGTCTAAGAAAGGTTGCTTGTATTGGGTTGGCAAGGCAGGTGAAGAGTCACACTCGGCCATCACTGATTATGACAGGACTGAGAAGGACATTACTCCAATGGGTGGATTCCCTCACTATGGTGTGGTAAAGGATGATTCTATTATGATTAGGGGTTGCTGTGTGGGACCCAAGAAGCGTGTGCTGACTCTTCGTCAGTCATTACTGAAGCAGACTTCTCGTGTGGCCCTTGAGGAGATCAAGCTCAAGTTCATTGACACTTCCTCCAAGTTTGGACATGGTCGCTTCCAGACCACTCAGGAGAAACAGAAGTTTTTTGGTCGCCTGAAGGCCTGA 1074 0.459 MSHRKFEHPRHGSLGFLPRKRDARHRGKAKAFPKDDPSKPCRLTAFMGYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPMVVVGVVGYMKTPRGLRTLNTVWAQHLSEELKRRFYKNWCKSKKKAFTKYSKKHETEEGKKDIQAQLEKLKIYASVIRVLAHTQIRKVKGLKQKKAHLMEIQVNGGTIAQKVDYAYGFFEKQIPVDAVFQKDEMIDIIVVTKGKGYEGVVTRWGVTRLPRKTHGSKKGCLYWVGKAGEESHSAITDYDRTEKDITPMGGFPHYGVVKDDSIMIRGCCVGPKKRVLTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0448 357 Gene3D Translation factors 206 357 - -
Lele13g0448 357 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 1 247 IPR045077 GO:0003735|GO:0005840|GO:0006412
Lele13g0448 357 FunFam Ribosomal protein L3 170 357 - -
Lele13g0448 357 MobiDBLite consensus disorder prediction 1 37 - -
Lele13g0448 357 FunFam 60S ribosomal protein L3 44 137 - -
Lele13g0448 357 FunFam 60S ribosomal protein L3 83 207 - -
Lele13g0448 357 SUPERFAMILY Translation proteins 4 338 IPR009000 -
Lele13g0448 357 Pfam Ribosomal protein L3 1 248 IPR000597 GO:0003735|GO:0005840|GO:0006412
Lele13g0448 357 Pfam Ribosomal protein L3 253 338 IPR000597 GO:0003735|GO:0005840|GO:0006412
Lele13g0448 357 Gene3D Ribosomal protein L3, domain 3 1 87 IPR044892 -
Lele13g0448 357 MobiDBLite consensus disorder prediction 1 20 - -
Lele13g0448 357 Gene3D - 88 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0448 Lele-ChrLele13 16717990 16724704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0448 1 354 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 77.202 0.0 593