Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0435 ATGTCAATTTCTACGAAGCTAGCTAGGTTTGTGCAGAAGAGAAAAATGGCAGAAGCAATACGAGACCTTGAAGATGATTTATGAGAGATGAGAAATATATGGGAAGTGGTGGATGGGTTGAAACCAGCGTTGTTGATGTTAAGTGTGCAAATTGCTTTTGCTTCAGTGAATGTGATGTATAAGGTTGCTATTAACCATGGAATGAGCGTTAGGGTTCTTACTGCTTATCGTCTAATTTTTGCTTCCGCTTTCACCAGTCCTCTTGCTCTCCTTCTTGAAAGGAACAAGAGACCAAAGCTGACTTGGAGGGTGTTGTTCATGTCATTTTTGTGTGGTTTATTCGGGGGAAGTTTGTTTCAAAACCTTTATTTTGAAGGTTTGGCTTTAATATCTGCAACGTTTGCTTCTGCTGTCTATAATCTCATTCCCGCTGTCACCTTTATCTTGGCAGTCTGCTGTGGATTAGAGAAATTAAATTTGGGTAAAGCAGCAGGGAAGGCAAAGGTATTAGGAACAATGATAGGGGTCGGAGGGGCCATGATGCTAACATTCGTCAAAGGCATAGAAATCAACATTTGGACAGTTCACATTCACCTTTTGCGTCATAATGCAGAAACCTCACAACAACATGGGAGCAAATTGCTTGGTATTTTCTGTGGCATTGCAAGTTGCTTCTGCTTCGCCCTTTGGCTCATCATACAGGCAAAGATGAGTAAGGAATACCCAAAGCATCATTCAAGCACAGCTTTGATGTCCACAATGGGAGCAATACAGGCCACTGTGTTTGCCCTTTGTATTGATAGAGATTGGACTCAATGGAGGTTGCATTGGAATGTTAGGCTCCTAACGGCAGTTTATTCGGGAGTAGTGGCATCAGGAATAATGGTTATAGTGATAGCATGGTGTGTGAGGATGAGGGGCCCACTGTATGCCTCAGTGTTCAATCCTCTCATGCTTGTGCTTGTCGCCATTGCTGGCTCTCTCATGTTGGATGAAAACCTCTACTTGGGCAGTGCGATTGGAGCAGTGCTGATAGTGGTCGGATTATATTTGGTGTTATGGGGAAAGAGTAAAGAGGCGAAGAAGATGAATCAATTAGTACCGGCGGATCAAATCTCTCAACAATCCCCAGCCGTTGAGATTGTTGTTCATCATCATGCTTCATCATTATCCAACAACAACATGATGATCAATCAACAACCAGTTGATGGTTCCCAGACTATGACCAAAGATGACCAAAACACACTCTCCTTATGA 1257 0.428 MSISTKLARFVQKRKMAEAIRDLEDDLXEMRNIWEVVDGLKPALLMLSVQIAFASVNVMYKVAINHGMSVRVLTAYRLIFASAFTSPLALLLERNKRPKLTWRVLFMSFLCGLFGGSLFQNLYFEGLALISATFASAVYNLIPAVTFILAVCCGLEKLNLGKAAGKAKVLGTMIGVGGAMMLTFVKGIEINIWTVHIHLLRHNAETSQQHGSKLLGIFCGIASCFCFALWLIIQAKMSKEYPKHHSSTALMSTMGAIQATVFALCIDRDWTQWRLHWNVRLLTAVYSGVVASGIMVIVIAWCVRMRGPLYASVFNPLMLVLVAIAGSLMLDENLYLGSAIGAVLIVVGLYLVLWGKSKEAKKMNQLVPADQISQQSPAVEIVVHHHASSLSNNNMMINQQPVDGSQTMTKDDQNTLSL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0435 418 Pfam EamA-like transporter family 215 353 IPR000620 GO:0016020
Lele13g0435 418 Pfam EamA-like transporter family 41 183 IPR000620 GO:0016020
Lele13g0435 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 76 184 - -
Lele13g0435 418 Coils Coil 13 27 - -
Lele13g0435 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 272 358 - -
Lele13g0435 418 PANTHER WAT1-RELATED PROTEIN 42 365 IPR030184 GO:0016020|GO:0022857
Lele13g0435 418 Coils Coil 29 33 - -
Lele13g0435 418 MobiDBLite consensus disorder prediction 396 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0435 Lele-ChrLele13 16599663 16604672 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0435 40 381 Nodulin-like Gene Family AT1G25270 40.988 4.98e-97 293