LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele13g0427	ATGGCAGATGCTTGTAAAATGGTTGAGGGATTGAAGCCGGCGATGTTAATGGTGGCGCTTCAGTTGACATACGCTGGCATCAATGTGCTGTACAAGCTCGTCGTCAACGATGGCATGAACCTCAGAATCGTCATTGCTTATCGTTATATGTTCGCCACTGCTTTCATGTCTCCCCTCGCTCTCATTCTTGACAGGAATAAAAGACCGAAGATGACTTGGAGCATACTGTTTCAGGCACTTCTGTGTGGGGTATTTGGAGGAGTAATGTCACAAAGCTTTTACTTGGAATCATTGGCTTTAACTTCTGCAACATTTTCTTCTGCAATGGCCAATCTTACTCCAGCCGTCACCTTTCTCATGGCCATCTCCTTCGGATTGGAAAGACTGAATATAGGAACAGTAGGAGGGCAAGTGAAGATCATTGGAACAATAGTGGCAATTGGTGGGGCCATGGTTCTAACATTCTTCAAAGGTGCACAAATAGCCACAGGCTCCTTCCACTTCACCCTCATGCATCCTCGTAAGGGACACGTGGCATCAGCACTGGCTCCTTCTAGTGTTAAGGCTCTCTTGGGTGCCCTTAATTCTCTAGGAAGCAGCAGCACTTATGCTTTATGGCTCATTGTTCAGGCTAAGATGGGCAAGAGTTACCCATGTTATTACTCAAGCACAGCTTTAATGAGTTTCATGGCAGCATTGGGATCAACTGCCTTTGCTTTTGCTCTTGAGAGAGATTTAACTCAATGGAAGTTGGGTTGGGATATTAGGCTTCTTACGGTGGCCTACGCGGGAATTATTGTTTCTGGAATCATGGTGGTGGCAATGTCTTGGGCTGTGGACATGAGAGGCCCTCTTTATGTGGCTGCTTTTAACCCTCTTCTCCTTGTCTTTGTGGCCCTAGCTGGTTGTTTTATGTTAGATGAGAAGTTATATCTTGGAAGTATAATAGGAGGGTTATTGATAGTATGTGGATTATACATGGTTCTATGGGGAAAAGGCAAAGAGGTGAAGAGTATGAGGCAACTTATTCCAACACAGAGCAGCCAGCTTCCTGAAATCATTGTGACATCACCAACAGATGATGATAAAAGCATCCCTCATAATAACAACAATCTTGTTGATTGTGATGATTCAATCATTTATCAAACACTGCAAGTGAAGTAG	1164	0.4416	MADACKMVEGLKPAMLMVALQLTYAGINVLYKLVVNDGMNLRIVIAYRYMFATAFMSPLALILDRNKRPKMTWSILFQALLCGVFGGVMSQSFYLESLALTSATFSSAMANLTPAVTFLMAISFGLERLNIGTVGGQVKIIGTIVAIGGAMVLTFFKGAQIATGSFHFTLMHPRKGHVASALAPSSVKALLGALNSLGSSSTYALWLIVQAKMGKSYPCYYSSTALMSFMAALGSTAFAFALERDLTQWKLGWDIRLLTVAYAGIIVSGIMVVAMSWAVDMRGPLYVAAFNPLLLVFVALAGCFMLDEKLYLGSIIGGLLIVCGLYMVLWGKGKEVKSMRQLIPTQSSQLPEIIVTSPTDDDKSIPHNNNNLVDCDDSIIYQTLQVK	387

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele13g0427	387	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	47	156	-	-
	Lele13g0427	387	Pfam	EamA-like transporter family	191	329	IPR000620	GO:0016020
	Lele13g0427	387	Pfam	EamA-like transporter family	13	145	IPR000620	GO:0016020
	Lele13g0427	387	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	248	334	-	-
	Lele13g0427	387	PANTHER	WAT1-RELATED PROTEIN	12	339	IPR030184	GO:0016020\|GO:0022857

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele13g0427	Lele-ChrLele13	16544565	16548975	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele13g0427	11	338	Nodulin-like Gene Family	AT1G25270	42.683	6.55e-90	273