Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0403 ATGATATGTGTTTTTGGTTTCTTTTTTCTTGTGGCAGAGGATGATGGAATTGATGATGAGGATCAAGATTCAAACACCATCAGTGATGATGAAGCGGATGAGGTGATGCATTTATCAAATCAAGGCTTCTTTCTCAAAGAGAGCGGTTTTCCCGATTCGTGGGAAACCGCTCGACCCTTTGGATTTGGCAACATTTTCAAGGCAGAATTTGGGGCAAACCGTATGAATTGCGAATTACTACAGGTTTCATATTTCAAATTGGGGATTTCTCAATTCGGCATCGATTTGATATTTGGGAAAGAAAGGAGCGTTATGGCCAGAGATTCCATACCTTTATCTCCCAAACGTGGGGAATGGGTGAAGGGGAAATTGGTAGGATCAGGATCTTTTGGGACTGTTCATTTAGCCATGAGCAAATCCACAGGAGGACTCTTTGTTGTTAAATCAGCACATACAAGGGCTGAATTTGCGACTTTAGAGAATGAGGTTGAAATTCTCAAGAATCTTGAACAATCTCCTTATATCGTACAATACTTAGGGTCAGAAAGAGATGGAGATGATCTCAGTGTTCTAATGGAGTACATGGCTGGGGGCAGTTTGGCTGATATTGCGGAGAAATTTGGTGGATCATTACAAGAAGATGTGGTTCGTTTGTATACACAAGAAATCCTTGAAGGCCTCAAGTATGTTCACGGTAATGGGATTGTGCACTGTGATCTTAAGTGCAAAAACGTGCTTGTGGGGTCTTCTGGGGACATCAAATTGGCAGATTTTGGATGTGCAAGGAGGGTGGATGAGTTGAAAAATAAAGATTTGATGCAGAATAATGTTAGTGGAACCCCTCTCTGGATGGCTCCTGAAGTTTTGAGGAATGAAAAGATCGATTTTGCTTCAGATATATGGTCTTTGGGATGCACTGTTATTGAAATGGCTACTGGTAGGCCTCCTTGGGGTGCTTCTAACTATGATTCAAACCCAATGGCTCTTATTTTGAAGATTGCCTGCGGTGATGAGATACCTAAATTCCCAACCCATTTCTCAAAGGAGGGTCTGGATTTCTTGAGGAGGTGTTTGGAGAGAGACTCAAGAAAAAGGTGGACATGTGAGGAATTACTTAGGCACCCATTTTTGTCAAGGGATTATTCATCAGTAACTGTAACAACAACACCATCTTCACCCAAAGACACTGCTTCCTCACCAGTCAGTGTGTTGTTGGGGTTCTCAAGTTTTGATTATGCTTATGATTTTGTGGATGAACCAGAGAGTCCAGAGGAACCAGAAAGTCCAGAGGAAAATGATTTCTCAGTAATAAACCCATTCGCATGTTGCAAAGATGGAAGAAAAGAGAGTGCAATGCTAAGAAATGGTGGTGAATGTGCATTTTGTTCATCACAGAATTGGATTACTGTCAGATCATGA 1419 0.4151 MICVFGFFFLVAEDDGIDDEDQDSNTISDDEADEVMHLSNQGFFLKESGFPDSWETARPFGFGNIFKAEFGANRMNCELLQVSYFKLGISQFGIDLIFGKERSVMARDSIPLSPKRGEWVKGKLVGSGSFGTVHLAMSKSTGGLFVVKSAHTRAEFATLENEVEILKNLEQSPYIVQYLGSERDGDDLSVLMEYMAGGSLADIAEKFGGSLQEDVVRLYTQEILEGLKYVHGNGIVHCDLKCKNVLVGSSGDIKLADFGCARRVDELKNKDLMQNNVSGTPLWMAPEVLRNEKIDFASDIWSLGCTVIEMATGRPPWGASNYDSNPMALILKIACGDEIPKFPTHFSKEGLDFLRRCLERDSRKRWTCEELLRHPFLSRDYSSVTVTTTPSSPKDTASSPVSVLLGFSSFDYAYDFVDEPESPEEPESPEENDFSVINPFACCKDGRKESAMLRNGGECAFCSSQNWITVRS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0403 472 Gene3D Transferase(Phosphotransferase) domain 1 115 405 - -
Lele13g0403 472 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Lele13g0403 472 SUPERFAMILY Protein kinase-like (PK-like) 117 417 IPR011009 -
Lele13g0403 472 Pfam Protein kinase domain 121 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0403 472 CDD STKc_MAPKKK 118 377 - -
Lele13g0403 472 SMART serkin_6 119 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0403 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Lele13g0403 472 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 75 399 - -
Lele13g0403 472 ProSiteProfiles Protein kinase domain profile. 119 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0403 Lele-ChrLele13 16313971 16317286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0403 80 380 MAP Kinase Kinase Kinase AT5G55090 44.951 1.31e-73 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele13g0403 Pkinase 3.8e-66 CL0016